Protein Alignment Sox15 and HMGB1

DIOPT Version :10

• Sequence 1: NP_523739.2
• Gene: Sox15 / 36575
• FlyBaseID: FBgn0005613
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_974413.1
• Gene: HMGB1 / 824351
• AraportID: AT3G51880
• Length: 185
• Species: Arabidopsis thaliana
• Alignment Length: 146
• Identity: 34/146 - (23%)
• Similarity: 58/146 - (39%)
• Gaps: 27/146 - (18%)

  Fly   195 PADLKYRPGGTQSKSAKE--SRIRRPMNAFMVWAKIERKKLADENPDLHNAD-LSKMLGKKWRSL 256
            ||:...:....:.|.||:  ::.:|..:||.|:.:..|.....|||::.... :.|..|:||:|:
plant    31 PAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSM 95

  Fly   257 TPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSNPK 321
            :..::.||.|:|                  .:||....:.|....|...|.|.......|:.|.:
plant    96 SQAEKAPYEEKA------------------AKRKAEYEKQMDAYNKNLEEGSDESEKSRSEINDE 142

  Fly   322 LATPPLATASSSYTTP 337
                  ..||...|.|
plant   143 ------DEASGEVTIP 152

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox15	NP_523739.2	HMG-box_SoxF	214..289	CDD:438841	17/75 (23%)
		PHA03273	305..>391	CDD:223031	8/33 (24%)
HMGB1	NP_974413.1	PRK05901	1..>171	CDD:235640	34/146 (23%)
		HMG-box_AtHMGB1-like	54..114	CDD:438821	19/77 (25%)