Protein Alignment Sox15 and Sox30

DIOPT Version :10

• Sequence 1: NP_523739.2
• Gene: Sox15 / 36575
• FlyBaseID: FBgn0005613
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_001414119.1
• Gene: Sox30 / 689918
• RGDID: 1586382
• Length: 770
• Species: Rattus norvegicus
• Alignment Length: 535
• Identity: 123/535 - (22%)
• Similarity: 185/535 - (34%)
• Gaps: 173/535 - (32%)

  Fly   194 LPADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTP 258
            ||:|... |....||. :...::||||||||||:|.|..||..||..:||::|..||.:|..|:.
  Rat   335 LPSDAGI-PDTPFSKD-RNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSE 397

  Fly   259 QDRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSNPKLA 323
            :.::||.:||::::..|..|.|.:.|:||           ||.:::...|.:....|:..| .::
  Rat   398 EQKKPYYDEAQKIKEKHREEFPGWVYQPR-----------PGKRKRFPLSVSNVFSGTTQN-IIS 450

  Fly   324 TPPLATASSSYTTPTDESTC----NSTNQNHGQSTPGGLYEQPLKPTYSPSSVDCYS-NADSTEQ 383
            |.|  |....|.:||.....    |:.....|::.|.  .:.|......||.:..:. :..||..
  Rat   451 TNP--TTIYPYRSPTYSVVIPGLQNTITHPVGEAPPA--IQLPTPAVQRPSPITLFQPSVSSTGP 511

  Fly   384 IESLAANCPPALLNESSPTGGGYDNSLLLKKLTKPS-------PSRAAKSRQEKLAKSEEKNKGS 441
            :    |..||:|....         ||..::.:.||       ||..::|.:.....|.|.....
  Rat   512 V----AVPPPSLTPRP---------SLPPQRFSGPSQTDVHRLPSGTSRSVKRPTPVSLESTNRI 563

  Fly   442 QSQGQSQQGIYAATYPL-APTSVAVVAARGMYVTCNN------RGLLDHGHSVKGTFYPPVSVSE 499
            .: |.|......||.|: .|...|.|:      ||..      ...:.|.|    .:.||
  Rat   564 PA-GASTAHARFATSPIQPPKEYAGVS------TCPRSTPIPPATPIPHSH----VYQPP----- 612

  Fly   500 DDNSTSMRNSISALQQHCNVVTSTPSSSGGTMPTSEMSSYTVSMADNCGNLRLSMNE---LSGNE 561
                                ....|::..||.|                  |.|.:.   |.|..
  Rat   613 --------------------PLGHPATLFGTPP------------------RFSFHHPYFLPGPH 639

  Fly   562 YLPSAN--------AYGM----------QYEDFLRYQSNDMDYSTSAVEHKETTSDSASGQKCLK 608
            |.||:.        .||.          .|||  |||.::..:  ||:.......|
  Rat   640 YFPSSTCPYSRPPFGYGNFPSSMPECLGYYED--RYQKHEAIF--SALNRDYPFRD--------- 691

  Fly   609 YPDTNQNYDD-----------------YEAEAYSNAMLPATAASYYTQLPYPPTSLAAFPLQLAV 656
            |||.:.:.:|                 :..|.|.|              |.||..:.|    |..
  Rat   692 YPDEHTHSEDSRSCESMDGPPYYNSHGHSGEEYLN--------------PMPPLDIGA----LEN 738

  Fly   657 PFQQTTSGAYGAQPI 671
            .|....|...|.|.:
  Rat   739 VFTAPASAPSGVQQV 753

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox15	NP_523739.2	HMG-box_SoxF	214..289	CDD:438841	33/74 (45%)
		PHA03273	305..>391	CDD:223031	18/90 (20%)
Sox30	NP_001414119.1	None