DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and SOX1

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_005977.2 Gene:SOX1 / 6656 HGNCID:11189 Length:391 Species:Homo sapiens


Alignment Length:492 Identity:109/492 - (22%)
Similarity:171/492 - (34%) Gaps:168/492 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 HSPMPMVSSAYVGGGTASGSLINSNIPLLGGGGNSVLNKFLSHPHAGMVGGGTGQMEDCTSHSPI 166
            |||         ||..|..:|  |.....||||.               |||.|           
Human    11 HSP---------GGAQAPTNL--SGPAGAGGGGG---------------GGGGG----------- 38

  Fly   167 EAASMWSYDYKGDLCAPNCGYLERHKPLPADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERK 231
                                                ||.....|.:.|::|||||||||::.:|:
Human    39 ------------------------------------GGGGGAKANQDRVKRPMNAFMVWSRGQRR 67

  Fly   232 KLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLR- 295
            |:|.|||.:||:::||.||.:|:.::..::||:::||:|||.:||.|||:|||||||:.::.|: 
Human    68 KMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLLKK 132

  Fly   296 -----------AMQPGGKEQSESSPNPGTGGSKSNPKLATP---------------------PLA 328
                       |...||..........|.|.:....:|.:|                     .:|
Human   133 DKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGGYAHVNGWANGAYPGSVA 197

  Fly   329 TASSSYTTPTDESTCNSTNQNHGQSTPGGLYEQPLKP-----------------------TYSP- 369
            .|:::.....:.......:...|.:.|   :..|..|                       .||| 
Human   198 AAAAAAAMMQEAQLAYGQHPGAGGAHP---HAHPAHPHPHHPHAHPHNPQPMHRYDMGALQYSPI 259

  Fly   370 SSVDCYSNADSTEQIESLAANCPPALLNESSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLAKS 434
            |:...|.:| |......|......|   .::..||.:.||.:.......:.|..|......|.||
Human   260 SNSQGYMSA-SPSGYGGLPYGAAAA---AAAAAGGAHQNSAVAAAAAAAAASSGALGALGSLVKS 320

  Fly   435 EEKNKGSQSQGQSQQGIYAATYPLAPTSVAVVAARGMYVTCNNRGLLDHGHSVKGTFYPPVSVSE 499
            |.  .||..         |..:..||....:.....||:.....|             .|.:.: 
Human   321 EP--SGSPP---------APAHSRAPCPGDLREMISMYLPAGEGG-------------DPAAAA- 360

  Fly   500 DDNSTSMRNSISALQQHCNVVTSTPSSSGGTMPTSEM 536
               :.:.::.:.:|.||   .....:...||:|.:.:
Human   361 ---AAAAQSRLHSLPQH---YQGAGAGVNGTVPLTHI 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 37/70 (53%)
SOX1NP_005977.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 20/113 (18%)
SOX-TCF_HMG-box 50..121 CDD:238684 37/70 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 214..249 4/37 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10270
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.910

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