DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sox15 and SOX17

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_071899.1 Gene:SOX17 / 64321 HGNCID:18122 Length:414 Species:Homo sapiens


Alignment Length:528 Identity:147/528 - (27%)
Similarity:189/528 - (35%) Gaps:173/528 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LSHPHAGMVGGGTGQMEDCTSHSPIEAASMWSYDYKGDLCAPNCGYLERHKPLPADLKYR----- 201
            :|.|.||.......|.:   |..|...|.:          .| |.:.|...|: .|:|.:     
Human     1 MSSPDAGYASDDQSQTQ---SALPAVMAGL----------GP-CPWAESLSPI-GDMKVKGEAPA 50

  Fly   202 ----PGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRR 262
                |.|...::..||||||||||||||||.|||:||.:|||||||:|||||||.|::||..::|
Human    51 NSGAPAGAAGRAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKR 115

  Fly   263 PYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPN----------------- 310
            |:|||||||||.||.:|||||||||||||.|......||.....:.|.                 
Human   116 PFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLG 180

  Fly   311 ----------------PGTGGS-KSNPKLATPPLATASSSYTTPT-DESTCNSTNQN---HGQST 354
                            |..||. :....|..|||    ..|..|| |.|..:..:.:   .....
Human   181 LQFPEQGFPAGPPLLPPHMGGHYRDCQSLGAPPL----DGYPLPTPDTSPLDGVDPDPAFFAAPM 241

  Fly   355 PGGLYEQPLKPTYSPSSVDCYSNADSTEQIESLAANCPPALLNESSPTGGGYDNSLLLKKLTKPS 419
            ||   :.|...|||.:.|..|:.              ||      .|..|             |.
Human   242 PG---DCPAAGTYSYAQVSDYAG--------------PP------EPPAG-------------PM 270

  Fly   420 PSRAAKSRQEKLAKSEEKNKGSQSQGQSQQGIYAATYPLAPTSVAVV--AARGMYVTCNNRGLL- 481
            ..|.                |.:..|.|..|:      |||.|...|  .|.|.......||.. 
Human   271 HPRL----------------GPEPAGPSIPGL------LAPPSALHVYYGAMGSPGAGGGRGFQM 313

  Fly   482 --DHGHSVKGTFYP--PVSVSEDDNSTSMRNSISALQQHCNVVTSTPSSSGGTMPTSEMSSYTVS 542
              .|.|..:...:|  |...|....:...|:...         .|.|:...|.:..:|...|.  
Human   314 QPQHQHQHQHQHHPPGPGQPSPPPEALPCRDGTD---------PSQPAELLGEVDRTEFEQYL-- 367

  Fly   543 MADNCGNLRLSMNELSGNEYLPSANAYGMQYEDFLRYQSND----MDYSTSAVEHKETTSDSASG 603
                                     .:..:.|..|.||.:|    :..|..|:  ....||::|.
Human   368 -------------------------HFVCKPEMGLPYQGHDSGVNLPDSHGAI--SSVVSDASSA 405

  Fly   604 QKCLKYPD 611
            .....|||
Human   406 VYYCNYPD 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 54/70 (77%)
SOX17NP_071899.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22 6/23 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..66 5/30 (17%)
SOX-TCF_HMG-box 67..138 CDD:238684 54/70 (77%)
Sox_C_TAD 201..412 CDD:288887 58/310 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 256..286 11/78 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..352 9/55 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 116 1.000 Domainoid score I5958
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 1 1.000 - - otm40697
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10270
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R685
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
66.030

Return to query results.
Submit another query.