DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and sox5

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_021330769.1 Gene:sox5 / 567413 ZFINID:ZDB-GENE-000607-13 Length:763 Species:Danio rerio


Alignment Length:427 Identity:111/427 - (25%)
Similarity:174/427 - (40%) Gaps:110/427 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NYNSKKYPHVSRTPEYSHSTGSDYPEHGGY-LTDGRLMHESNSDAGIYHVRQGSEHSSPSLHSPA 79
            |.:||.....|::|     |....|:.... |..|.|.|.:.|..|    ...|..||..|.| :
Zfish   393 NLSSKPKASESKSP-----TSPASPQVPALKLGPGSLKHSAPSSIG----GPPSRLSSIDLLS-S 447

  Fly    80 IQSSGYENEHLNEAVLAAHSHSHSPM------PMVSSAYVGGGTASGSLINSNIPLLGGGGNSVL 138
            |.|:||.|:|  |||..|...:....      ..|..|.|   .|..||..:|       |.|..
Zfish   448 ITSAGYLNDH--EAVTKAFQEARKMKEQLKREEQVLDAKV---AAVNSLSLNN-------GRSEK 500

  Fly   139 NKFLSHPHAGMVGGGTGQMEDCT-SHSPIEAASMWSYDYKGDLCAPNCGYLERHKPLPADLK-YR 201
            .:|:.......:.....|.|:.. :|      :|..:...||         ....|..:|.: :|
Zfish   501 VRFMEKAALESLSQQLKQSEESKFTH------AMMDFGISGD---------SDGSPSVSDSRIFR 550

  Fly   202 PGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVE 266
            .  .:.:.:.|..|:|||||||||||.||:|:....||:||:::||:||.:|:|:|..:::||.|
Zfish   551 E--ARGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYE 613

  Fly   267 EAERLRVIHMTEHPNYKYRPRRRKQ-----SKLR-----AMQPGGKEQSESSPNPGTGGSKSNPK 321
            |..||...|:.::|:|||:||.::.     .|||     |:....:::.......|        :
Zfish   614 EQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFTVG--------Q 670

  Fly   322 LATPPLATASSSY------------TTPTDESTCNSTNQNHGQSTPGGLYEQPLKPTYSPSSVDC 374
            .|..||::|...|            ..|::.|:.:|:             .:|:.||        
Zfish   671 QAQLPLSSAGVVYPGALSMAGMPSPQMPSEHSSMSSS-------------PEPVPPT-------- 714

  Fly   375 YSNADSTEQIESLAANCPPALLNE---SSPTGGGYDN 408
             |.|...:::|       |.:..|   ....|..||:
Zfish   715 -SQASYFKEVE-------PRVKEELRMDDGNGDAYDD 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 36/70 (51%)
sox5XP_021330769.1 SSL_OB 332..>415 CDD:332684 7/26 (27%)
SOX-TCF_HMG-box 561..632 CDD:238684 36/70 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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