DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and sox5

DIOPT Version :10

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_021330769.1 Gene:sox5 / 567413 ZFINID:ZDB-GENE-000607-13 Length:763 Species:Danio rerio


Alignment Length:427 Identity:111/427 - (25%)
Similarity:174/427 - (40%) Gaps:110/427 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 NYNSKKYPHVSRTPEYSHSTGSDYPEHGGY-LTDGRLMHESNSDAGIYHVRQGSEHSSPSLHSPA 79
            |.:||.....|::|     |....|:.... |..|.|.|.:.|..|    ...|..||..|.| :
Zfish   393 NLSSKPKASESKSP-----TSPASPQVPALKLGPGSLKHSAPSSIG----GPPSRLSSIDLLS-S 447

  Fly    80 IQSSGYENEHLNEAVLAAHSHSHSPM------PMVSSAYVGGGTASGSLINSNIPLLGGGGNSVL 138
            |.|:||.|:|  |||..|...:....      ..|..|.|   .|..||..:|       |.|..
Zfish   448 ITSAGYLNDH--EAVTKAFQEARKMKEQLKREEQVLDAKV---AAVNSLSLNN-------GRSEK 500

  Fly   139 NKFLSHPHAGMVGGGTGQMEDCT-SHSPIEAASMWSYDYKGDLCAPNCGYLERHKPLPADLK-YR 201
            .:|:.......:.....|.|:.. :|      :|..:...||         ....|..:|.: :|
Zfish   501 VRFMEKAALESLSQQLKQSEESKFTH------AMMDFGISGD---------SDGSPSVSDSRIFR 550

  Fly   202 PGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVE 266
            .  .:.:.:.|..|:|||||||||||.||:|:....||:||:::||:||.:|:|:|..:::||.|
Zfish   551 E--ARGRGSSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNLEKQPYYE 613

  Fly   267 EAERLRVIHMTEHPNYKYRPRRRKQ-----SKLR-----AMQPGGKEQSESSPNPGTGGSKSNPK 321
            |..||...|:.::|:|||:||.::.     .|||     |:....:::.......|        :
Zfish   614 EQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYFTVG--------Q 670

  Fly   322 LATPPLATASSSY------------TTPTDESTCNSTNQNHGQSTPGGLYEQPLKPTYSPSSVDC 374
            .|..||::|...|            ..|::.|:.:|:             .:|:.||        
Zfish   671 QAQLPLSSAGVVYPGALSMAGMPSPQMPSEHSSMSSS-------------PEPVPPT-------- 714

  Fly   375 YSNADSTEQIESLAANCPPALLNE---SSPTGGGYDN 408
             |.|...:::|       |.:..|   ....|..||:
Zfish   715 -SQASYFKEVE-------PRVKEELRMDDGNGDAYDD 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 HMG-box_SoxF 214..289 CDD:438841 39/74 (53%)
PHA03273 305..>391 CDD:223031 15/97 (15%)
sox5XP_021330769.1 PRK13042 332..>415 CDD:183854 7/26 (27%)
HMG-box_SoxD 561..637 CDD:438839 39/75 (52%)

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