DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and sox12

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001025449.1 Gene:sox12 / 562381 ZFINID:ZDB-GENE-040724-33 Length:355 Species:Danio rerio


Alignment Length:412 Identity:104/412 - (25%)
Similarity:154/412 - (37%) Gaps:150/412 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 IRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEH 279
            |:|||||||||::|||:|:.::.||:|||::||.|||:|:.|...::.|:::||||||:.||.::
Zfish    53 IKRPMNAFMVWSQIERRKIMEQWPDMHNAEISKRLGKRWKLLPDYEKIPFIKEAERLRLKHMADY 117

  Fly   280 PNYKYRPRRRKQS----KLRAMQPGGKEQSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDE 340
            |:||||||::.:.    ||....|    ...|.|.||.....|...|...|   |||.:      
Zfish   118 PDYKYRPRKKSKGSTPVKLGEKLP----MKSSKPLPGRSSGLSCKGLKIKP---ASSKH------ 169

  Fly   341 STCNSTNQNHGQSTPGGLYEQPLKPTYSPSSVDCYSNADSTEQIESLAANCPPALLNESSPTGGG 405
                                   |..:|.:....||.:.|.:....         :|..||    
Zfish   170 -----------------------KMNFSSNKYKSYSESMSDDDTMD---------VNLESP---- 198

  Fly   406 YDNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQ--------SQGQSQQGIYAATYPLAPTS 462
                                     :.:.:::|..|.        .|.:.||       |:....
Zfish   199 -------------------------VTQQDDRNTSSHFVLHQQATVQSEDQQ-------PIPELR 231

  Fly   463 VAVVAARGMYVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNSTSMRNSISALQQHCNVVTSTP--S 525
            |.|                            |:|.:....|.|   |.|..|......||.|  |
Zfish   232 VKV----------------------------PISQTSSIQSLS---SDSECQAFPESTTSEPRGS 265

  Fly   526 SSG-GTMPTSEMSSYTVSMADNCGNLRLSMNELSGNEYLPSANAYGMQYEDFLRYQSNDMDYSTS 589
            :|| .:.|||..||..||.|  |.:..|.                    |:.|...||.|....|
Zfish   266 TSGRSSTPTSTSSSSLVSSA--CSDEELD--------------------EELLHIISNSMPMDCS 308

  Fly   590 AVEHKETTSDSASGQKCLKYPD 611
            .:: |:..:.:|:......:||
Zfish   309 TLD-KDFEAFNANSGSHFDFPD 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 38/69 (55%)
sox12NP_001025449.1 SOX-TCF_HMG-box 52..123 CDD:238684 38/69 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10270
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R685
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.940

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