DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and sox9

DIOPT Version :10

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001016853.1 Gene:sox9 / 549607 XenbaseID:XB-GENE-1034769 Length:482 Species:Xenopus tropicalis


Alignment Length:495 Identity:137/495 - (27%)
Similarity:209/495 - (42%) Gaps:102/495 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 SHSPMPMVSSAYVGGGTASGSLINSNIPLLGGGGNSVLNKFLSHPHAGMVGGGTGQMEDCTSHSP 165
            |.:|.|.:|....|....|||            |:...|   :.|.......|..:::..|.   
 Frog    19 SGAPSPTMSEDSAGSPCPSGS------------GSDTEN---TRPQENTFPKGDPELKKETE--- 65

  Fly   166 IEAASMWSYDYKGDLCAPNC------GYLERHKPLPADLKYRPGGTQSKSAKESRIRRPMNAFMV 224
                     |.|..:|....      ||.....|:|..:.   |.::||    ..::||||||||
 Frog    66 ---------DEKFPVCIREAVSQVLKGYDWTLVPMPVRVN---GSSKSK----PHVKRPMNAFMV 114

  Fly   225 WAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRR 289
            ||:..|:||||:.|.||||:|||.|||.||.|...::||:||||||||:.|..:||:|||:||||
 Frog   115 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRIQHKKDHPDYKYQPRRR 179

  Fly   290 KQSKL-RAMQPGGKEQSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDESTCNSTNQNHGQS 353
            |..|. ::.|..|.||:..|||......:::    :|..|::.|...:|.:.|     .|:.|..
 Frog   180 KSVKNGQSEQEDGAEQTHISPNAIFKALQAD----SPHSASSMSEVHSPGEHS-----GQSQGPP 235

  Fly   354 TPGGLYE---QPLKPTY------------SPSSVDCYSNAD----STEQIES------------L 387
            ||....:   ||.||..            .|..:| :.:.|    |:|.|.:            |
 Frog   236 TPPTTPKTDVQPGKPDLKREGRPLQESGRQPPHID-FRDVDIGELSSEVISTIETFDVNEFDQYL 299

  Fly   388 AANCPPALLNESSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKG----SQSQGQSQ 448
            ..|..|.:.:..:|..|.|..:..........|:..:|.:|::..:.:.....    :..|.|||
 Frog   300 PPNGHPGVGSTQAPYTGSYGINSTPSATPGAGPAWMSKQQQQQQQQPQPPQHSLSTINSEQSQSQ 364

  Fly   449 QGIYAATYPLAPTSVAVVAARGM-----YVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNSTSMRN 508
            |..:..|..|:|:..:....:..     |.:.|    |.|..|    .||.::.::.| .|..:.
 Frog   365 QRTHIKTEQLSPSHYSDQQQQHSPQQLNYSSFN----LQHYSS----SYPTITRAQYD-YTEHQG 420

  Fly   509 SISALQQHCNVVTSTPSSSGGTMPTSEMSSYTVSMADNCG 548
            | ::...|.:...|...|:...|..|:...|| .:||..|
 Frog   421 S-NSYYSHASGQNSGLYSNFSYMNPSQRPMYT-PIADTTG 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 HMG-box_SoxF 214..289 CDD:438841 47/74 (64%)
PHA03273 305..>391 CDD:223031 23/116 (20%)
sox9NP_001016853.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..66 13/73 (18%)
Sox_N 22..94 CDD:463586 19/98 (19%)
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P48436 63..103 11/58 (19%)
PQA. /evidence=ECO:0000250|UniProtKB:P48436 63..103 11/58 (19%)
HMG-box_SoxE 104..178 CDD:438840 46/73 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..274 37/123 (30%)
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P48436 224..308 19/89 (21%)
9aaTAD 1. /evidence=ECO:0000250|UniProtKB:P48436 276..285 2/8 (25%)
9aaTAD 2. /evidence=ECO:0000250|UniProtKB:P48436 291..299 0/7 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..395 18/99 (18%)
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P48436 366..482 23/104 (22%)
9aaTAD 3. /evidence=ECO:0000250|UniProtKB:P48436 433..441 2/7 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 448..482 5/12 (42%)

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