DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and sox9

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001016853.1 Gene:sox9 / 549607 XenbaseID:XB-GENE-1034769 Length:482 Species:Xenopus tropicalis


Alignment Length:495 Identity:137/495 - (27%)
Similarity:209/495 - (42%) Gaps:102/495 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 SHSPMPMVSSAYVGGGTASGSLINSNIPLLGGGGNSVLNKFLSHPHAGMVGGGTGQMEDCTSHSP 165
            |.:|.|.:|....|....|||            |:...|   :.|.......|..:::..|.   
 Frog    19 SGAPSPTMSEDSAGSPCPSGS------------GSDTEN---TRPQENTFPKGDPELKKETE--- 65

  Fly   166 IEAASMWSYDYKGDLCAPNC------GYLERHKPLPADLKYRPGGTQSKSAKESRIRRPMNAFMV 224
                     |.|..:|....      ||.....|:|..:.   |.::||    ..::||||||||
 Frog    66 ---------DEKFPVCIREAVSQVLKGYDWTLVPMPVRVN---GSSKSK----PHVKRPMNAFMV 114

  Fly   225 WAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRR 289
            ||:..|:||||:.|.||||:|||.|||.||.|...::||:||||||||:.|..:||:|||:||||
 Frog   115 WAQAARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRIQHKKDHPDYKYQPRRR 179

  Fly   290 KQSKL-RAMQPGGKEQSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDESTCNSTNQNHGQS 353
            |..|. ::.|..|.||:..|||......:::    :|..|::.|...:|.:.|     .|:.|..
 Frog   180 KSVKNGQSEQEDGAEQTHISPNAIFKALQAD----SPHSASSMSEVHSPGEHS-----GQSQGPP 235

  Fly   354 TPGGLYE---QPLKPTY------------SPSSVDCYSNAD----STEQIES------------L 387
            ||....:   ||.||..            .|..:| :.:.|    |:|.|.:            |
 Frog   236 TPPTTPKTDVQPGKPDLKREGRPLQESGRQPPHID-FRDVDIGELSSEVISTIETFDVNEFDQYL 299

  Fly   388 AANCPPALLNESSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKG----SQSQGQSQ 448
            ..|..|.:.:..:|..|.|..:..........|:..:|.:|::..:.:.....    :..|.|||
 Frog   300 PPNGHPGVGSTQAPYTGSYGINSTPSATPGAGPAWMSKQQQQQQQQPQPPQHSLSTINSEQSQSQ 364

  Fly   449 QGIYAATYPLAPTSVAVVAARGM-----YVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNSTSMRN 508
            |..:..|..|:|:..:....:..     |.:.|    |.|..|    .||.::.::.| .|..:.
 Frog   365 QRTHIKTEQLSPSHYSDQQQQHSPQQLNYSSFN----LQHYSS----SYPTITRAQYD-YTEHQG 420

  Fly   509 SISALQQHCNVVTSTPSSSGGTMPTSEMSSYTVSMADNCG 548
            | ::...|.:...|...|:...|..|:...|| .:||..|
 Frog   421 S-NSYYSHASGQNSGLYSNFSYMNPSQRPMYT-PIADTTG 458

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 44/70 (63%)
sox9NP_001016853.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..66 13/73 (18%)
Sox_N 22..94 CDD:403592 19/98 (19%)
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P48436 63..103 11/58 (19%)
PQA. /evidence=ECO:0000250|UniProtKB:P48436 63..103 11/58 (19%)
SOX-TCF_HMG-box 104..174 CDD:238684 43/69 (62%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..274 37/123 (30%)
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P48436 224..308 19/89 (21%)
9aaTAD 1. /evidence=ECO:0000250|UniProtKB:P48436 276..285 2/8 (25%)
9aaTAD 2. /evidence=ECO:0000250|UniProtKB:P48436 291..299 0/7 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 295..395 18/99 (18%)
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P48436 366..482 23/104 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 448..482 5/12 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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