DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and tcf7

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001012389.1 Gene:tcf7 / 497649 ZFINID:ZDB-GENE-050222-4 Length:355 Species:Danio rerio


Alignment Length:319 Identity:76/319 - (23%)
Similarity:123/319 - (38%) Gaps:81/319 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SKKYPHVSRTPEYSHSTGSDYPEHGG---------YLTDGRLMHESNSDAGIYHVRQGSEHSSPS 74
            |.|..|:...|:: |..|.....:.|         ||.:|.:...||.   :..|:||....:|.
Zfish    73 SDKREHLDDVPKH-HDGGMYKAPYSGYPFLMLPEPYLPNGPVSPPSNK---VSVVQQGMHPLTPL 133

  Fly    75 LHSPAIQSSGYENEHLNEAVLAAHSHSHSPMPMVSSAYVGGGTASGSLINSNIPLLGGGGNSVLN 139
            |          ..||.|.      |.:|.|        ..||...|...:....:.|        
Zfish   134 L----------PYEHFNP------SPTHMP--------TDGGQKPGVHRHQTQEISG-------- 166

  Fly   140 KFLSHPHAGMVGGGTGQME---DCTSHSPIEAASMWSYDYKGDLCAPNCGYLERHKPLPADLKYR 201
             |.|.|.        ||:.   :..|||.:..:.|...........|..|..| |......: |.
Zfish   167 -FYSLPQ--------GQITPSMNWFSHSLMLQSGMHPTGIPHPAIVPPSGKQE-HDQFDRSI-YN 220

  Fly   202 PGGTQSKSAKESR---IRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRP 263
            ....::|..||.:   |::|:||||::.|..|.|:..|.....:|.::::||::|.:||.:::..
Zfish   221 KSHAEAKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALTREEQAK 285

  Fly   264 YVEEAERLRVIHMTEHPNYKYR---------PRRRKQSKLRAMQPGGKEQSESSPNPGT 313
            |.|.|.:.|.:|:..:|::..|         .:|||:.|          |.:||..||:
Zfish   286 YYELARKERQLHVQLYPSWSARDNYVSALGKKKRRKRDK----------QQDSSTGPGS 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 22/73 (30%)
tcf7NP_001012389.1 CTNNB1_binding 1..181 CDD:285538 32/152 (21%)
SOX-TCF_HMG-box 237..307 CDD:238684 22/69 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 58 1.000 Inparanoid score I5417
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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