DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and sox11

DIOPT Version :10

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001008053.1 Gene:sox11 / 493415 XenbaseID:XB-GENE-483418 Length:383 Species:Xenopus tropicalis


Alignment Length:359 Identity:98/359 - (27%)
Similarity:152/359 - (42%) Gaps:89/359 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 IRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEH 279
            |:|||||||||:||||:|:.:::||:|||::||.|||:|:.|...::.|::.||||||:.||.::
 Frog    48 IKRPMNAFMVWSKIERRKIMEQSPDMHNAEISKRLGKRWKMLNDSEKIPFIREAERLRLKHMADY 112

  Fly   280 PNYKYRPRRRKQSKLRAMQPGGKEQS-ESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDESTC 343
            |:||||||::.:....|.:|....|| |.||...:.|.|. ||| .|...:.|||.:......|.
 Frog   113 PDYKYRPRKKPKVDPSASKPASLAQSPEKSPKSRSAGKKC-PKL-KPGSHSGSSSSSGSAKSLTI 175

  Fly   344 NSTNQNHGQSTPGGLYEQPLKPTYSPSSVDC-YSNADSTEQIESLAANCPPALLNESSPTGGGYD 407
            .|  :..|.....|      .|..:..:..| :.:.|..|:.|....:                :
 Frog   176 KS--EYGGDDYVFG------SPKAASKAAKCVFMDEDDEEEEEDEEED----------------E 216

  Fly   408 NSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQSQGQSQQGIYAATYPLAPTSVAVVAARGMY 472
            ..:.:|:..:..|     .||..:||.......|.|..:|.:|                  ..||
 Frog   217 LQIRIKQEEEDEP-----LRQYNVAKVPASPTLSSSSAESAEG------------------ASMY 258

  Fly   473 VTCNNRGLLDHGHSVKGT--FYPPVSVSEDDNSTSMRNSISALQQHCNVVTSTPSSSGGTMPTSE 535
            ....|           ||  :|...::::.          |.:.|....:...|.|:|.|.|:|.
 Frog   259 EDVRN-----------GTRLYYNFKNITKQ----------STIPQATITLAPAPRSAGTTSPSSH 302

  Fly   536 MSSYTVSMA---------------DNCGNLRLSM 554
            .......::               .|.|||.||:
 Frog   303 KDELMFDLSLNFTQQNPPVPELGNPNSGNLSLSL 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 HMG-box_SoxF 214..289 CDD:438841 43/73 (59%)
PHA03273 305..>391 CDD:223031 22/87 (25%)
sox11NP_001008053.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
HMG-box_SoxC_SOX11 37..128 CDD:438846 43/79 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 115..174 22/60 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..231 6/54 (11%)
Blue background indicates that the domain is not in the aligned region.

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