DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and Sox100B

DIOPT Version :10

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster


Alignment Length:560 Identity:146/560 - (26%)
Similarity:214/560 - (38%) Gaps:143/560 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 KESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIH 275
            |:..|:||||||||||:..|:.::.:.|.|.|::|||.|||.|::|...|::|::|.||:||:.|
  Fly    73 KKEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTH 137

  Fly   276 MTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNP-----GTGGSKSNPKLATPPLATASSSYT 335
            ..|||:|||:|||:|...|.:.|.|    ...||.|     .|.||...|:.:.......:....
  Fly   138 KQEHPDYKYQPRRKKARVLPSQQSG----EGGSPGPEMTLSATMGSSGKPRSSNSNGQRRAGKGN 198

  Fly   336 TPTDESTCNST--NQNHGQSTPGGLYEQPLKPTYSPSSVDCYSNADSTEQIESLAANCPPALLNE 398
            ...|..:|.||  :.|.|.                 :|.|.:||....:.:.|..|    |.|.|
  Fly   199 AAADLGSCASTISHANVGS-----------------NSSDVFSNEAFMKSLNSACA----ASLME 242

  Fly   399 SSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQSQGQSQQGIYAATYPLAPTSV 463
            .|....|.|           ||...|.|                   .|.....|..|.:||::.
  Fly   243 QSLIETGLD-----------SPCSTASS-------------------MSSLTPPATPYNVAPSNA 277

  Fly   464 AVVAARGMYVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNSTSMRNSISALQQHCNVVTSTPSSSG 528
            ...||       ||..||....|      .||:.:.|....    .:.|.:::..:         
  Fly   278 KASAA-------NNPSLLLRQLS------EPVANAGDGYGV----LLEAGREYVAI--------- 316

  Fly   529 GTMPTSEMSSYTVSMADNCGNLRLSMNELSGNE--YLPSANAYG------MQYEDFLRYQSNDMD 585
            |.:.....|:...|.|:..|         :|.|  :|.:.|.||      :.|..: .|.:|...
  Fly   317 GEVNYQGQSAGVQSGAEGGG---------AGQEMDFLENINGYGGYTGSRVSYPAY-SYPANGGH 371

  Fly   586 YSTSAVEHKETTSDSASGQKCLKYPDTNQNYDDYEAEAY-SNAMLPATAASY-------YTQLPY 642
            ::|...:.::....|    :.|.|.....:.|..|.:.| .:.|||.|...:       :..|.:
  Fly   372 FATEEQQQQQALQAS----EALNYKPAAADIDPKEIDQYFMDQMLPMTQHHHPHHTHPLHHPLHH 432

  Fly   643 PPTSLAAFPLQLAVPFQQTTSGAYGAQPIQSGYLHYGNYGGYEGMAQSQPQN-----QAPVHHQQ 702
            .|      ||..:.......|.|...||:...|.|.    ||...|.|..||     |.|  :..
  Fly   433 SP------PLNSSASLSSACSSASSQQPVAEYYEHL----GYSPAASSASQNPNFGPQQP--YAN 485

  Fly   703 ASHSAPPSLSVP-PNQTVTSNSAAISMQQH----HHHHFG 737
            .:.|..|:|..| |.|.:.|..   ..|||    .||.:|
  Fly   486 GAASMTPTLGDPAPQQELQSQQ---QEQQHQNPSQHHLWG 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 HMG-box_SoxF 214..289 CDD:438841 39/74 (53%)
PHA03273 305..>391 CDD:223031 19/92 (21%)
Sox100BNP_651839.1 HMG-box_SoxE 76..150 CDD:438840 38/73 (52%)

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