DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and Sox100B

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_651839.1 Gene:Sox100B / 45039 FlyBaseID:FBgn0024288 Length:529 Species:Drosophila melanogaster


Alignment Length:560 Identity:146/560 - (26%)
Similarity:214/560 - (38%) Gaps:143/560 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 KESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIH 275
            |:..|:||||||||||:..|:.::.:.|.|.|::|||.|||.|::|...|::|::|.||:||:.|
  Fly    73 KKEHIKRPMNAFMVWAQAARRVMSKQYPHLQNSELSKSLGKLWKNLKDSDKKPFMEFAEKLRMTH 137

  Fly   276 MTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNP-----GTGGSKSNPKLATPPLATASSSYT 335
            ..|||:|||:|||:|...|.:.|.|    ...||.|     .|.||...|:.:.......:....
  Fly   138 KQEHPDYKYQPRRKKARVLPSQQSG----EGGSPGPEMTLSATMGSSGKPRSSNSNGQRRAGKGN 198

  Fly   336 TPTDESTCNST--NQNHGQSTPGGLYEQPLKPTYSPSSVDCYSNADSTEQIESLAANCPPALLNE 398
            ...|..:|.||  :.|.|.                 :|.|.:||....:.:.|..|    |.|.|
  Fly   199 AAADLGSCASTISHANVGS-----------------NSSDVFSNEAFMKSLNSACA----ASLME 242

  Fly   399 SSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQSQGQSQQGIYAATYPLAPTSV 463
            .|....|.|           ||...|.|                   .|.....|..|.:||::.
  Fly   243 QSLIETGLD-----------SPCSTASS-------------------MSSLTPPATPYNVAPSNA 277

  Fly   464 AVVAARGMYVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNSTSMRNSISALQQHCNVVTSTPSSSG 528
            ...||       ||..||....|      .||:.:.|....    .:.|.:::..:         
  Fly   278 KASAA-------NNPSLLLRQLS------EPVANAGDGYGV----LLEAGREYVAI--------- 316

  Fly   529 GTMPTSEMSSYTVSMADNCGNLRLSMNELSGNE--YLPSANAYG------MQYEDFLRYQSNDMD 585
            |.:.....|:...|.|:..|         :|.|  :|.:.|.||      :.|..: .|.:|...
  Fly   317 GEVNYQGQSAGVQSGAEGGG---------AGQEMDFLENINGYGGYTGSRVSYPAY-SYPANGGH 371

  Fly   586 YSTSAVEHKETTSDSASGQKCLKYPDTNQNYDDYEAEAY-SNAMLPATAASY-------YTQLPY 642
            ::|...:.::....|    :.|.|.....:.|..|.:.| .:.|||.|...:       :..|.:
  Fly   372 FATEEQQQQQALQAS----EALNYKPAAADIDPKEIDQYFMDQMLPMTQHHHPHHTHPLHHPLHH 432

  Fly   643 PPTSLAAFPLQLAVPFQQTTSGAYGAQPIQSGYLHYGNYGGYEGMAQSQPQN-----QAPVHHQQ 702
            .|      ||..:.......|.|...||:...|.|.    ||...|.|..||     |.|  :..
  Fly   433 SP------PLNSSASLSSACSSASSQQPVAEYYEHL----GYSPAASSASQNPNFGPQQP--YAN 485

  Fly   703 ASHSAPPSLSVP-PNQTVTSNSAAISMQQH----HHHHFG 737
            .:.|..|:|..| |.|.:.|..   ..|||    .||.:|
  Fly   486 GAASMTPTLGDPAPQQELQSQQ---QEQQHQNPSQHHLWG 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 36/70 (51%)
Sox100BNP_651839.1 SOX-TCF_HMG-box 76..146 CDD:238684 35/69 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450166
Domainoid 1 1.000 49 1.000 Domainoid score I4418
eggNOG 1 0.900 - - E1_KOG0527
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.740

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