Protein Alignment Sox15 and hmg20a

DIOPT Version :10

• Sequence 1: NP_523739.2
• Gene: Sox15 / 36575
• FlyBaseID: FBgn0005613
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_001006760.1
• Gene: hmg20a / 448440
• XenbaseID: XB-GENE-955353
• Length: 345
• Species: Xenopus tropicalis
• Alignment Length: 406
• Identity: 73/406 - (17%)
• Similarity: 136/406 - (33%)
• Gaps: 157/406 - (38%)

  Fly   184 NCGYLERHKPLPADLKYRPGG-TQSKSAKES-----RIRRPMNAFMVWAKIERKKLADENPDLHN 242
            |.|.|.:.:.||   |.|.|| |:.:..|.|     ..:.|:..::.:....|::|..|.||:..
 Frog    67 NSGELRQEEELP---KTRRGGWTKGRKRKRSPRDNNAPKAPLTGYVRFMNERREQLRTERPDVPF 128

  Fly   243 ADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYK----YRPRRRK-QSKLRAMQPGGK 302
            .::::::|.:|..|...:::.|::|||:.:..:..|...|:    |:...|| ||:    |.|.:
 Frog   129 PEITRIVGSEWSKLPAHEKQHYLDEAEKDKERYTKELQQYQNTDAYQTYSRKAQSR----QKGRQ 189

  Fly   303 EQSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDESTCNSTNQNHGQSTPGGLYEQPLKPTY 367
            ::.|     |..|         .|:.|...|.                       |.|:|:
 Frog   190 QRQE-----GVRG---------VPINTEKESI-----------------------LKERPI---- 213

  Fly   368 SPSSVDCYSNADSTEQIESLAANCPPALLNESSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLA 432
                                                  :|..:..::....|.:|.|:.||  |.
 Frog   214 --------------------------------------FDIPIFTEEFLNHSKAREAELRQ--LR 238

  Fly   433 KS----EEKNKGSQSQGQSQQGIYAATYPLAPTSVAVVAARGMYVTCNNRGLLDHGHSVKGTFYP 493
            ||    ||:|...|...:|.:.                |.:.:....|
 Frog   239 KSNMEFEERNAALQKHVESMRS----------------AVQRLEAELN----------------- 270

  Fly   494 PVSVSEDDNSTSMRNSISALQQ---HCNVVTSTPSSSGGTMPTSEMSSYTVSMADNC-------- 547
                .|.:.::.::..:.:::|   ||  :.|.|......:||.|.....:|...|.
 Frog   271 ----QEQERNSLLQQHLQSVRQALTHC--LQSVPIPGTTEIPTLETIDLYMSRLQNAVLTHPKES 329

  Fly   548 ----GNLRLSMNELSG 559
                ..:|..:::|.|
 Frog   330 EVIISGVREVLSQLEG 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox15	NP_523739.2	HMG-box_SoxF	214..289	CDD:438841	16/78 (21%)
		PHA03273	305..>391	CDD:223031	9/85 (11%)
hmg20a	NP_001006760.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..124		16/59 (27%)
		HMG-box_HMG20A	81..184	CDD:438833	25/102 (25%)
		SMC_prok_B	<151..>292	CDD:274008	39/262 (15%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	167..198		11/48 (23%)