Protein Alignment Sox15 and tHMG2

DIOPT Version :10

• Sequence 1: NP_523739.2
• Gene: Sox15 / 36575
• FlyBaseID: FBgn0005613
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_001163689.1
• Gene: tHMG2 / 42651
• FlyBaseID: FBgn0038979
• Length: 134
• Species: Drosophila melanogaster
• Alignment Length: 184
• Identity: 37/184 - (20%)
• Similarity: 67/184 - (36%)
• Gaps: 72/184 - (39%)

  Fly   213 SRIRRPMNAFMVWA-KIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHM 276
            :|.::||:|||:|. ...||.:..|:||....::|...|:.||::..:.:..:.|.|.:.    |
  Fly     7 ARPKKPMSAFMLWMNSTGRKNIRAEHPDFSVQEVSVKGGEMWRAMADEHKIVWQESASKA----M 67

  Fly   277 TEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDES 341
            .|:        :.|..|..|.:   :.|:||.|:
  Fly    68 AEY--------KEKLEKWNAFK---EHQTESFPH------------------------------- 90

  Fly   342 TCNSTNQNHGQSTPGGLYEQPLKPTYSPS----SVDCYSNADSTEQIESLAANC 391
                            :||.||...:|.:    ::..|.:.|     |::|..|
  Fly    91 ----------------IYEAPLSSRFSKTNQRPTLFVYDSKD-----EAMAPIC 123

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sox15	NP_523739.2	HMG-box_SoxF	214..289	CDD:438841	20/75 (27%)
		PHA03273	305..>391	CDD:223031	12/89 (13%)
tHMG2	NP_001163689.1	HMG-box_SSRP1-like	11..78	CDD:438810	21/78 (27%)