DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and Sox21a

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001261827.1 Gene:Sox21a / 39567 FlyBaseID:FBgn0036411 Length:407 Species:Drosophila melanogaster


Alignment Length:546 Identity:136/546 - (24%)
Similarity:187/546 - (34%) Gaps:209/546 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LMHESNSDAGIYHVRQGSEHSSPSLHSPAIQSSGYENEHLNEAVLAAHSHSHSPMPMVSSAYVGG 115
            |:|.|:|                  ||....|||..|          ||||.|..|.:..     
  Fly     7 LLHRSHS------------------HSNGYTSSGSSN----------HSHSSSLSPQLPG----- 38

  Fly   116 GTASGSLINSNIPLLGGGGNSVLNKFLSHPHAGM---VGGGTGQMEDCTSHSPIEAASMWSYDYK 177
                   ||..:.::||.|            .||   ||.|:|.    |:..|:..|        
  Fly    39 -------INLGLGMVGGLG------------MGMSVGVGSGSGN----TTPPPMPPA-------- 72

  Fly   178 GDLCAPNCGYLERHKPLP------------------ADLKYRPGGTQSKSAKESRIRRPMNAFMV 224
             ||..|...      |.|                  |...:....|.|.......|:||||||||
  Fly    73 -DLAVPPAA------PTPVAPKMHQHTHHHGNSHHNAPTSHSNSNTGSHHNSHDHIKRPMNAFMV 130

  Fly   225 WAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRR 289
            |::.:|:|:|.:||.:||:::||.||.:|:.||...:||:::||:|||.:||.|||:|||||||:
  Fly   131 WSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRK 195

  Fly   290 KQSKLRAMQPGG-------------KEQSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDES 341
            .::..::..|||             ......:..|...||..:||...|.|:....|..      
  Fly   196 PKTLNKSPVPGGGGGGGGGGANGGVNAGGAGNSGPSGPGSVGSPKDMQPQLSPLGQSLP------ 254

  Fly   342 TCNSTNQNHGQSTPGGLYEQPLKPTYSPSSVDCYSNADSTEQIESLAANCPPALLNESSPTGGGY 406
                  ..||..........|..|...|..|             .|||    |.|  |:..|.|.
  Fly   255 ------HLHGHPHQSPYQSHPHHPHPHPHHV-------------QLAA----ATL--SAKYGFGS 294

  Fly   407 DNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQSQGQSQQGIYAATYPLAPTSVAVVAAR-- 469
            ...|.|.:|....|.                               .|.|||.||....:.||  
  Fly   295 PLELSLPRLPNAFPG-------------------------------LAHYPLDPTLALDLQARLQ 328

  Fly   470 GMYVTCNNRGLLDHGHSVKGTFY----------------PPVS----VSEDDNSTSMRNSISALQ 514
            .||.               |:.|                ||.|    :|......|.::|.:|:.
  Fly   329 AMYA---------------GSIYHPWRYLPLISPETPPSPPSSSGTGISSYGCVKSEKSSPNAVV 378

  Fly   515 QHC----NVVTSTPSSSG-GTMPTSE 535
            ...    |::..||...| ||..::|
  Fly   379 ASAASPPNIIXPTPLRFGAGTSSSAE 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 38/70 (54%)
Sox21aNP_001261827.1 SOX-TCF_HMG-box 120..191 CDD:238684 38/70 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451318
Domainoid 1 1.000 49 1.000 Domainoid score I4418
eggNOG 1 0.900 - - E1_KOG0527
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10270
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R685
SonicParanoid 00.000 Not matched by this tool.
76.870

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