DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and tcf7

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_031753653.1 Gene:tcf7 / 395061 XenbaseID:XB-GENE-855462 Length:488 Species:Xenopus tropicalis


Alignment Length:478 Identity:100/478 - (20%)
Similarity:177/478 - (37%) Gaps:151/478 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 RTPEYSHSTGSDYPEHGGYLTDGRLMHESNSDAGIYHVRQGSEHSSPSLHSPAIQSSGYENEHLN 91
            |.|| ||      ||......|.:|:::   |....|:..|.:|....::    :.|||.:    
 Frog    59 RVPE-SH------PEAMRRTQDAQLVYQ---DKLTDHMEDGVKHQDEGMY----KGSGYPS---- 105

  Fly    92 EAVLAAHSHSHSPMPMVSSAYVGGGTASGSLINSNIPLL--GGGGNSVL---NKFLSH-PHAGMV 150
                       .|..|:|..|:..|:.|.  ::|.:|::  ..|.:.::   |:..|| .|:..:
 Frog   106 -----------YPFLMLSDPYLSNGSVSA--LSSKVPVVQPSHGVHPLIPYNNESFSHGSHSTHL 157

  Fly   151 GGGTGQMEDCTSHSPIEAASMWSYDYK------GDLC------------APNCGYLERHK----- 192
            .....|.:..  |.|.:.|.:.:: |.      |.:.            .|:||:.:.:.     
 Frog   158 PADLNQKQGV--HRPAQTADIPTF-YPLPSGGVGQISPSVGWQSQPVYPIPSCGFRQPYSATLSS 219

  Fly   193 ----------------------PLPA---------------DLKYRPGGTQSKSAKESRIRRPMN 220
                                  |.||               ::|......:.:..|:..|::|:|
 Frog   220 GPSYSRFPHPLMLSPSMHTTGIPHPAIIPHSGNKDIDCYERNMKPHSEPKREREPKKPTIKKPLN 284

  Fly   221 AFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHP----- 280
            |||::.|..|.|:..|.....:|.::::||::|.:|:.:::..|.|.|.:.|.:||..:|     
 Frog   285 AFMLYMKEMRAKVIAECTLKESAAINQILGRRWHALSREEQSKYYELARKERQLHMQLYPGWSAR 349

  Fly   281 -NYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTD----- 339
             ||..|.||.::           :..:||.:||           :|....|.......||     
 Frog   350 DNYGKRKRRTRE-----------KHQDSSSDPG-----------SPKKCRARFGLNQQTDWCGPC 392

  Fly   340 --ESTCNSTNQNHGQ-----STPGGLYEQPLKPTYS----PSSVDCYSNADSTEQIESL--AANC 391
              :..|....|..|:     |:.|...:.|..|..|    |||  .|..|..:...:|:  |.:|
 Frog   393 RRKKKCIRYLQGEGRCGSPVSSDGSAIDSPPSPLNSRHSMPSS--AYPTAKLSSPADSVQSAQSC 455

  Fly   392 PPALLN---ESSPTGGGYDNSLL 411
            .|:..:   .||....||..:.|
 Frog   456 SPSSSSSTVRSSLISPGYKGAFL 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 24/76 (32%)
tcf7XP_031753653.1 CTNNB1_binding 1..196 CDD:400583 35/170 (21%)
SOX-TCF_HMG-box 279..349 CDD:238684 22/69 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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