Sequence 1: | NP_523739.2 | Gene: | Sox15 / 36575 | FlyBaseID: | FBgn0005613 | Length: | 784 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_988849.1 | Gene: | sox17b.1 / 394440 | XenbaseID: | XB-GENE-484865 | Length: | 376 | Species: | Xenopus tropicalis |
Alignment Length: | 480 | Identity: | 130/480 - (27%) |
---|---|---|---|
Similarity: | 185/480 - (38%) | Gaps: | 151/480 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 184 NC------GYLERHKPL----PADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENP 238
Fly 239 DLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKE 303
Fly 304 QSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDESTCNSTNQNHGQSTPGGLYE--QPLKPT 366
Fly 367 YSPSSVDCYSNADSTEQIESLAANCPPALLNESSPTGGGYDNSLL--LKKLTKPSPSRAAKSRQE 429
Fly 430 KLAKSEEKN-KGSQSQGQSQQG-IY----AATYPLAPTSVAVVAARGMYVTCNNRGLLDHGHSVK 488
Fly 489 GTFYPPVSVSEDDNSTSMRNSISALQQHCNVVTSTPSSSGGTMPTSEMSSYTVSMADNCGNLRLS 553
Fly 554 MNELSGNEYLPSANAYGMQYEDFLRYQSNDMDYSTSAVEHKETTSDSASGQKCLKYPDTNQNYD- 617
Fly 618 DYEAEAYSNAMLP-----ATAASYY 637 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sox15 | NP_523739.2 | SOX-TCF_HMG-box | 214..285 | CDD:238684 | 52/70 (74%) |
sox17b.1 | NP_988849.1 | SOX-TCF_HMG-box | 57..128 | CDD:238684 | 52/70 (74%) |
PABP-1234 | <80..250 | CDD:130689 | 63/190 (33%) | ||
Required for transcriptional activity and interaction with ctnnb1. /evidence=ECO:0000250|UniProtKB:O42601 | 327..331 | 0/3 (0%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 116 | 1.000 | Domainoid score | I5873 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000028 | |
OrthoInspector | 1 | 1.000 | - | - | otm47877 | |
Panther | 1 | 1.100 | - | - | O | PTHR10270 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R685 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.040 |