DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and sox8b

DIOPT Version :10

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001020636.3 Gene:sox8b / 386704 ZFINID:ZDB-GENE-031114-1 Length:356 Species:Danio rerio


Alignment Length:372 Identity:106/372 - (28%)
Similarity:146/372 - (39%) Gaps:96/372 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 QMEDCTSHSPI---EAASMWSYDYKGDLCAPNCGYLERHKPLPADLKYRPGGTQSKSAKESRIRR 217
            |.||.....|:   :|.|.....|...|.           |:|..:.   |..:||    ..::|
Zfish    42 QAEDEDGRFPVCIRDAVSQVLKGYDWSLV-----------PMPVRVS---GSGKSK----PHVKR 88

  Fly   218 PMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNY 282
            |||||||||:..|:||||:.|.||||:|||.|||.||.||..::||:|||||||||.|..:||:|
Zfish    89 PMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLTESEKRPFVEEAERLRVQHKKDHPDY 153

  Fly   283 KYRPRRRKQSKLRAMQPGGKEQSESS--------PNPGTGGSKSNPKLATPPLATASSSYTTPTD 339
            ||:|||||:     ::||..|....|        ..||.|....:|...|               
Zfish   154 KYQPRRRKR-----VEPGHAESEAGSELMQHMYKAEPGMGRLTGSPDHIT--------------- 198

  Fly   340 ESTCNSTNQNHGQSTPGGLYEQPLKP-TYSP----SSVDCYSNADSTEQIESLAANC-------- 391
                :.|...||..||      |..| |..|    .::| :||.|.:|....:..|.        
Zfish   199 ----DHTGHPHGPPTP------PTTPKTEHPQGPKQNID-FSNVDISELSTDVIGNMTFDLQEFD 252

  Fly   392 --------PPALLNESSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQSQGQSQ 448
                    ..|....:.|.|.......:..|..:.||...::......:.|..:.:.::....|.
Zfish   253 QYLPLTPDQGACSRRAPPAGAHLHPQRVHIKTEQRSPQHYSEHSSTLYSSSSAQCEYTEHSFYSP 317

  Fly   449 QGIYAATYPLAPTSVAVVAARGMYVTCNNRGLLDHGHSVKGTFYPPV 495
            ...|...||.....:..:.|               .||....:.|||
Zfish   318 YSSYPYPYPYLHRPILNIPA---------------PHSSSAHWDPPV 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 HMG-box_SoxF 214..289 CDD:438841 49/74 (66%)
PHA03273 305..>391 CDD:223031 20/98 (20%)
sox8bNP_001020636.3 None

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