DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and sox2

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_998283.1 Gene:sox2 / 378723 ZFINID:ZDB-GENE-030909-1 Length:315 Species:Danio rerio


Alignment Length:363 Identity:98/363 - (26%)
Similarity:161/363 - (44%) Gaps:70/363 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 ERHKPLPADLKYRPGGTQSKSAKE----SRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKML 249
            |...|.|.......|.|.|....:    .||:|||||||||::.:|:|:|.|||.:||:::||.|
Zfish     8 ELKPPAPQPNTGGTGNTNSSGNNQKNSPDRIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRL 72

  Fly   250 GKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLR---------AMQPGGKEQS 305
            |.:|:.|:..::||:::||:|||.:||.|||:|||||||:.::.::         .:.|||....
Zfish    73 GAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGGNGMG 137

  Fly   306 ESSPNPGTG-GSKSNPKLATPPLATASSSYTTPTDESTCNSTNQNHGQSTPG-GLYEQPLKPTYS 368
             :....|.| |:..|.::         .||.            ..:|.:..| |:.::.|.....
Zfish   138 -AGVGVGAGLGAGVNQRM---------DSYA------------HMNGWTNGGYGMMQEQLGYPQH 180

  Fly   369 PSSVDCYSNADSTEQIESLAANCPPALLNESSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLAK 433
            ||     .||.:|.|::.:......||...|......|.|.         ||:.:....|:....
Zfish   181 PS-----LNAHNTAQMQPMHRYDMSALQYNSMTNSQTYMNG---------SPTYSMSYSQQSTPG 231

  Fly   434 SEEKNKGSQSQGQSQQGIYAATYPLAPTSVAVVAARGMYVTCNNRGLLDHGHSVKGTFYPPVSVS 498
            ....:.||..:.:|      ::.|...||.:...| |...|.:.|.::        :.|.|.:..
Zfish   232 MTLGSMGSVVKSES------SSSPPVVTSSSHSRA-GQCQTGDLRDMI--------SMYLPGAEV 281

  Fly   499 EDDNSTSMRNSISALQQHCNVVTSTPSSSGGTMPTSEM 536
            :|.::.|..:    :.||........::..||:|.|.|
Zfish   282 QDQSAQSRLH----MSQHYQSAPVPGTTINGTIPLSHM 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 39/70 (56%)
sox2NP_998283.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41 8/32 (25%)
SOX-TCF_HMG-box 37..108 CDD:238684 39/70 (56%)
SOXp 107..197 CDD:289133 24/116 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 235..263 8/34 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..315 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10270
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.910

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