DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sox15 and Sox14

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001286801.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster


Alignment Length:742 Identity:166/742 - (22%)
Similarity:259/742 - (34%) Gaps:250/742 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HLLTNYNSKKYPHVSRTPEYSHSTGSDYPEHGGYLTDGRLMHESNSDAGIYHVRQGSEHSSP--- 73
            |.|..::....|..|.:|..:.:.|:               .::.|.|.|.|....:..|:|   
  Fly    51 HTLPPFSPSPSPASSPSPAPAQTPGA---------------QKTQSQAAITHPAAVASPSAPVAA 100

  Fly    74 ----SLHSPAIQSSGYENEHLNEAVLAAHSHSH----SPMPMVSSAYVGGGTASGSLINSNIPLL 130
                :..:|..:|:     |       .|:|:|    ||.|..|..   .|..|.|.....:.|.
  Fly   101 AAPKTPKTPEPRST-----H-------THTHTHSQHFSPPPRESEM---DGERSPSHSGHEMTLS 150

  Fly   131 GGGGNSVLNKFLSHPHAGMVGGGTGQMEDCTSHSPIEAASMWSYDYKGDLCAPNCGYLERHKPLP 195
            ..|.:|           .:|.|        ::..|:.:::.:|                      
  Fly   151 MDGIDS-----------SLVFG--------SARVPVNSSTPYS---------------------- 174

  Fly   196 ADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQD 260
                   ..|::|......|:|||||||||:::||:|:.:..||||||::||.||::|:.|:..|
  Fly   175 -------DATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDD 232

  Fly   261 RRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSNPKLATP 325
            ::||:.|||:||.:||.|:|||||||::::.....:::|........:.|..|..:.|...||..
  Fly   233 KQPYIIEAEKLRKLHMIEYPNYKYRPQKKQTRSPGSLKPNQDADGCEARNDTTNNNNSLTTLAIN 297

  Fly   326 PLATASSSYTTPTDESTCNS------TNQNHGQSTPGGLYEQPLKPTYSPSSVD----------- 373
            ...||.......|  |||.|      ...:.|.::....||..::.....:|.|           
  Fly   298 GTTTAGRKSKRST--STCQSGSASKRLRNDSGDTSSKPKYEVKMESAEQLNSADIILPSADNLIS 360

  Fly   374 ----------CYSNADSTEQIESLAANCP---------------PALL----------------- 396
                      ..||||..|::.|..::.|               |..|                 
  Fly   361 YQSSEYLPLSTLSNADCDEKLHSELSSGPLESRENLSEVVNRFLPLFLGGNEDSQLGVSSLTQSQ 425

  Fly   397 -NESSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQSQGQSQQGIYAATYPLAP 460
             |:|.||.|..||      ::..||....:...|::.:                  |.....:.|
  Fly   426 HNQSDPTAGLMDN------ISDISPINDREELTEEVMR------------------YLPYLEVNP 466

  Fly   461 TSVAVVAARGMYVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNSTSMRNSISALQQ---------H 516
            :|      .|:.:...:..||  |..:.    .||..|| ||..:..|..||..|         .
  Fly   467 SS------DGLTLKVESSSLL--GKPLN----EPVFDSE-DNIVNDANLHSASHQIPPYVPDSHD 518

  Fly   517 CNVVTSTPSSSGGTMPTSEMSSYTVSMADNCGNLRLSMNELSGNEYLPSANAYGMQYEDFLRYQS 581
            |........||...:....:...||:|...|              .||    ||........:|:
  Fly   519 CFAEDCGGDSSSHQVEFEVVRPQTVTMTMTC--------------TLP----YGGPDAGHTTFQA 565

  Fly   582 NDMDYSTSAVEHKE----TTSDS--------------ASGQKCLKYPDTNQNYD----------D 618
            :|.:...||.|..|    |||:|              |.|..|..   ..|:|.          :
  Fly   566 DDFNAIPSAAEDSECSILTTSNSPQIGFNGSSFVEADAIGSTCTY---AQQDYTGSVIETHNDLN 627

  Fly   619 YEAEAYSNAMLPATAASYYTQLPYPPT 645
            |.|...:.|:|..|    :..||..||
  Fly   628 YAAHDNNGALLAYT----FEDLPPQPT 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 40/70 (57%)
Sox14NP_001286801.1 SOX-TCF_HMG-box 186..257 CDD:238684 40/70 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451316
Domainoid 1 1.000 49 1.000 Domainoid score I4418
eggNOG 1 0.900 - - E1_KOG0527
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10270
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R685
SonicParanoid 00.000 Not matched by this tool.
76.870

Return to query results.
Submit another query.