DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and Sox14

DIOPT Version :10

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_476894.1 Gene:Sox14 / 37822 FlyBaseID:FBgn0005612 Length:669 Species:Drosophila melanogaster


Alignment Length:742 Identity:166/742 - (22%)
Similarity:259/742 - (34%) Gaps:250/742 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HLLTNYNSKKYPHVSRTPEYSHSTGSDYPEHGGYLTDGRLMHESNSDAGIYHVRQGSEHSSP--- 73
            |.|..::....|..|.:|..:.:.|:               .::.|.|.|.|....:..|:|   
  Fly    51 HTLPPFSPSPSPASSPSPAPAQTPGA---------------QKTQSQAAITHPAAVASPSAPVAA 100

  Fly    74 ----SLHSPAIQSSGYENEHLNEAVLAAHSHSH----SPMPMVSSAYVGGGTASGSLINSNIPLL 130
                :..:|..:|:     |       .|:|:|    ||.|..|..   .|..|.|.....:.|.
  Fly   101 AAPKTPKTPEPRST-----H-------THTHTHSQHFSPPPRESEM---DGERSPSHSGHEMTLS 150

  Fly   131 GGGGNSVLNKFLSHPHAGMVGGGTGQMEDCTSHSPIEAASMWSYDYKGDLCAPNCGYLERHKPLP 195
            ..|.:|           .:|.|        ::..|:.:::.:|                      
  Fly   151 MDGIDS-----------SLVFG--------SARVPVNSSTPYS---------------------- 174

  Fly   196 ADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQD 260
                   ..|::|......|:|||||||||:::||:|:.:..||||||::||.||::|:.|:..|
  Fly   175 -------DATRTKKHSPGHIKRPMNAFMVWSQMERRKICERTPDLHNAEISKELGRRWQLLSKDD 232

  Fly   261 RRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSNPKLATP 325
            ::||:.|||:||.:||.|:|||||||::::.....:::|........:.|..|..:.|...||..
  Fly   233 KQPYIIEAEKLRKLHMIEYPNYKYRPQKKQTRSPGSLKPNQDADGCEARNDTTNNNNSLTTLAIN 297

  Fly   326 PLATASSSYTTPTDESTCNS------TNQNHGQSTPGGLYEQPLKPTYSPSSVD----------- 373
            ...||.......|  |||.|      ...:.|.::....||..::.....:|.|           
  Fly   298 GTTTAGRKSKRST--STCQSGSASKRLRNDSGDTSSKPKYEVKMESAEQLNSADIILPSADNLIS 360

  Fly   374 ----------CYSNADSTEQIESLAANCP---------------PALL----------------- 396
                      ..||||..|::.|..::.|               |..|                 
  Fly   361 YQSSEYLPLSTLSNADCDEKLHSELSSGPLESRENLSEVVNRFLPLFLGGNEDSQLGVSSLTQSQ 425

  Fly   397 -NESSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQSQGQSQQGIYAATYPLAP 460
             |:|.||.|..||      ::..||....:...|::.:                  |.....:.|
  Fly   426 HNQSDPTAGLMDN------ISDISPINDREELTEEVMR------------------YLPYLEVNP 466

  Fly   461 TSVAVVAARGMYVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNSTSMRNSISALQQ---------H 516
            :|      .|:.:...:..||  |..:.    .||..|| ||..:..|..||..|         .
  Fly   467 SS------DGLTLKVESSSLL--GKPLN----EPVFDSE-DNIVNDANLHSASHQIPPYVPDSHD 518

  Fly   517 CNVVTSTPSSSGGTMPTSEMSSYTVSMADNCGNLRLSMNELSGNEYLPSANAYGMQYEDFLRYQS 581
            |........||...:....:...||:|...|              .||    ||........:|:
  Fly   519 CFAEDCGGDSSSHQVEFEVVRPQTVTMTMTC--------------TLP----YGGPDAGHTTFQA 565

  Fly   582 NDMDYSTSAVEHKE----TTSDS--------------ASGQKCLKYPDTNQNYD----------D 618
            :|.:...||.|..|    |||:|              |.|..|..   ..|:|.          :
  Fly   566 DDFNAIPSAAEDSECSILTTSNSPQIGFNGSSFVEADAIGSTCTY---AQQDYTGSVIETHNDLN 627

  Fly   619 YEAEAYSNAMLPATAASYYTQLPYPPT 645
            |.|...:.|:|..|    :..||..||
  Fly   628 YAAHDNNGALLAYT----FEDLPPQPT 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 HMG-box_SoxF 214..289 CDD:438841 43/74 (58%)
PHA03273 305..>391 CDD:223031 23/112 (21%)
Sox14NP_476894.1 HMG-box_SoxC 186..261 CDD:438838 43/74 (58%)

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