DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and Tcf7l1

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001073290.1 Gene:Tcf7l1 / 21415 MGIID:1202876 Length:599 Species:Mus musculus


Alignment Length:496 Identity:104/496 - (20%)
Similarity:169/496 - (34%) Gaps:156/496 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EHPHHL-----LTNYNSKKY----PHVSRTPEYSHSTGSDYPEHGGYLTD---------GRLMHE 54
            :||||:     |..|::..:    |....:||....||...|.|...|:.         |::.|.
Mouse   195 QHPHHMHPLTPLITYSNDHFSPASPPTHLSPEIDPKTGIPRPPHPSELSPYYPLSPGAVGQIPHP 259

  Fly    55 -----SNSDAGIYHVRQGS-EHSSPSLHSPAIQSSGYENEHLNEAVLAAHSHSHSPMPMVSSAYV 113
                 ......:|.:..|. .|..|:|...|..||           |.:....|    ||:.|:.
Mouse   260 LGWLVPQQGQPMYSLPPGGFRHPYPALAMNASMSS-----------LVSSRFPH----MVAPAHP 309

  Fly   114 GGGTASGSLINSNIPLLGGGGNSVLNKFLSHPHAGMVGGGTGQMEDCTSHSPIEAASMWSYDYKG 178
            |            :|..|            .||..:|             |||         .|.
Mouse   310 G------------LPTSG------------IPHPAIV-------------SPI---------VKQ 328

  Fly   179 DLCAPNCGYLERHKPLPADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNA 243
            :..||:..        ||.....|...:.:..|:..:::|:||||::.|..|.|:..|.....:|
Mouse   329 EPAAPSLS--------PAVSAKSPVTVKKEEEKKPHVKKPLNAFMLYMKEMRAKVVAECTLKESA 385

  Fly   244 DLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHP------NYKYRPRRRKQSKLRAMQPGGK 302
            .::::||:||.:|:.:::..|.|.|.:.|.:|...:|      ||..:.:|:::.:|...|    
Mouse   386 AINQILGRKWHNLSREEQAKYYELARKERQLHAQLYPTWSARDNYGKKKKRKREKQLSQTQ---- 446

  Fly   303 EQSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDESTCNSTNQNHGQ-----STPGGLYEQP 362
            .|.:.....|...|||.....         .|..|  |..|:|...:||.     :||......|
Mouse   447 SQQQIQEAEGALASKSKKPCI---------QYLPP--EKPCDSPASSHGSTLDSPATPSAALASP 500

  Fly   363 LKPTYSPSSVDCYSNADSTEQIESLAANCPPALLNESSPTGGGYDNSLLLKKLTKPSPSRAAKSR 427
            ..|.           |..:||.:.|:..                         |||. :||..:.
Mouse   501 AAPA-----------ATHSEQAQPLSLT-------------------------TKPE-ARAQLAL 528

  Fly   428 QEKLAKSEEKNKGSQSQGQSQQGIYAATYPLAPTSVAVVAA 468
            ......|.:....:.||..||..:.:...||.....|::.:
Mouse   529 HSAAFLSAKAAASNSSQMGSQPPLLSRPLPLGSMPAALLTS 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 23/76 (30%)
Tcf7l1NP_001073290.1 CTNNB1_binding 28..262 CDD:285538 16/66 (24%)
SOX-TCF_HMG-box 356..427 CDD:238684 21/70 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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