DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and Sox30

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_775560.1 Gene:Sox30 / 214105 MGIID:1341157 Length:782 Species:Mus musculus


Alignment Length:520 Identity:121/520 - (23%)
Similarity:184/520 - (35%) Gaps:174/520 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 LPADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTP 258
            ||:|... |....||. :...::||||||||||:|.|..||..||..:||::|..||.:|..|:.
Mouse   347 LPSDAGI-PDTPFSKD-RNGHVKRPMNAFMVWARIHRPALAKANPAANNAEISVQLGLEWNKLSE 409

  Fly   259 QDRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSNPKLA 323
            :.::||.:||::::..|..|.|.:.|:||           ||.:::...|.:....|:..| .::
Mouse   410 EQKKPYYDEAQKIKEKHREEFPGWVYQPR-----------PGKRKRFPLSVSNVFSGTTQN-IIS 462

  Fly   324 TPPLATASSSYTTPTDESTC----NSTNQNHGQSTPGGLYEQPLKPTYSPSSVDCYS-NADSTEQ 383
            |.|  |....|.:||.....    |:.....|::.|.  .:.|......||.:..:. :..||..
Mouse   463 TNP--TTIYPYRSPTYSVVIPGLQNTITHPVGEAPPA--IQLPTPAVQRPSPITLFQPSVSSTGP 523

  Fly   384 IESLAANCPPALLNESSPTGGGYDNSLLLKKLTKPS-------PSRAAKSRQEKLAKSEEKNKGS 441
            :    |..||:|....         ||..::.:.||       ||.:::|.:.....|.|.....
Mouse   524 V----AVPPPSLTPRP---------SLPPQRFSGPSQTDIHRLPSGSSRSVKRSTPGSLESTTRI 575

  Fly   442 QSQGQSQQGIYAATYPLAP----TSVAVVAARGMYVTCNN------RGLLDHGHSVKGTFYPPVS 496
            .: |.|......||.|:.|    .||:         ||..      ...:.|.|    .:.||  
Mouse   576 PA-GASTAHARFATSPIQPPKEYASVS---------TCPRSTPIPPATPIPHSH----VYQPP-- 624

  Fly   497 VSEDDNSTSMRNSISALQQHCNVVTSTPSSSGGTMPTSEMSSYTVSMADNCGNLRLSMNE---LS 558
                                   ....|::..||.|                  |.|.:.   |.
Mouse   625 -----------------------PLGHPATLFGTPP------------------RFSFHHPYFLP 648

  Fly   559 GNEYLPSAN--------AYGM----------QYEDFLRYQSNDMDYSTSAVEHKETTSDSASGQK 605
            |..|.||:.        .||.          .|||  |||.::..:  ||:.......|      
Mouse   649 GPHYFPSSTCPYSRPPFGYGNFPSSMPECLGYYED--RYQKHEAIF--SALNRDYPFRD------ 703

  Fly   606 CLKYPDTNQNYDD-----------------YEAEAYSNAM-------------LPATAASYYTQL 640
               |||.:.:.:|                 :..|.|.|||             .||:|.|...|:
Mouse   704 ---YPDEHTHSEDSRSCESMDGPPYYSSHGHGGEEYLNAMPTLDIGALENVFTAPASAPSGVQQV 765

  Fly   641  640
            Mouse   766  765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 30/70 (43%)
Sox30NP_775560.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..117
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..226
SOX-TCF_HMG-box 365..435 CDD:238684 30/69 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 501..604 27/125 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 704..724 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 756..782 4/10 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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