DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and Sox6

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_006507560.1 Gene:Sox6 / 20679 MGIID:98368 Length:828 Species:Mus musculus


Alignment Length:449 Identity:106/449 - (23%)
Similarity:165/449 - (36%) Gaps:157/449 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DYPEHGGYLTDGRLMHESNSDAGIYHVRQGSEHSSPSLHSP----------AIQSSGYENEH--- 89
            |..||||    |...:....:. :|..:..|...||....|          |:..:|.:||.   
Mouse   352 DPSEHGG----GHSYNHRQIEQ-LYAAQLASMQVSPGAKMPSTPQPPNSAGAVSPTGIKNEKRGT 411

  Fly    90 --------------LN------------------EAVLAAHSHSHSPMPMVSS--AYVGGGTASG 120
                          ||                  :.:..|...|...:|..||  :.:||....|
Mouse   412 SPVTQVKDETTAQPLNLSSRPKTAEPVKSPTSPTQNLFPASKTSPVNLPNKSSIPSPIGGSLGRG 476

  Fly   121 S----LINSNIPLLGGGGNSVLNKF--------------LSHPHA-------------------- 147
            |    |.:.|.|.|.|..::|:...              ...||.                    
Mouse   477 SSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQPHGVDGKLSSMNNMGLSNCRTEK 541

  Fly   148 -------------------GMVGGGTGQM---EDCTSHSPI--EAASMWSYDYKGDLCAPNCGYL 188
                               |.:|.|...:   ||......:  .||.:..|     .|.|..|  
Mouse   542 ERTRFENLGPQLTGKSSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQY-----YCWPTGG-- 599

  Fly   189 ERHKPLPADLK-YRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKK 252
                ...|:.: ||  ..:.:::.|..|:|||||||||||.||:|:....||:||:::||:||.:
Mouse   600 ----ATVAEARVYR--DARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSR 658

  Fly   253 WRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPR---------------------RRKQSKLRA 296
            |:|::.|:::||.||..||..||:.::|||||:||                     |.::.::|.
Mouse   659 WKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQ 723

  Fly   297 MQPGGKEQSESSPNPGTGGSKSNPKLATPPLATASSSYTTPTDESTCNSTNQNHGQSTP 355
            ....| :|.:.....|||       :..|...|.:::..:|...|.|:||:.:...|.|
Mouse   724 FFTVG-QQPQMPITTGTG-------VVYPGAITMATTTPSPQMTSDCSSTSASPEPSLP 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 38/70 (54%)
Sox6XP_006507560.1 SOX-TCF_HMG-box 620..691 CDD:238684 38/70 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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