DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and Sox3

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_033263.2 Gene:Sox3 / 20675 MGIID:98365 Length:450 Species:Mus musculus


Alignment Length:368 Identity:106/368 - (28%)
Similarity:168/368 - (45%) Gaps:95/368 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 GGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEE 267
            ||.....:.:.|::|||||||||::.:|:|:|.|||.:||:::||.||..|:.||..::||:::|
Mouse   132 GGGGGGGSDQDRVKRPMNAFMVWSRGQRRKMALENPKMHNSEISKRLGADWKLLTDAEKRPFIDE 196

  Fly   268 AERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSNPKLATPPLATASS 332
            |:|||.:||.|:|:|||||||:.::.|       |:...|.|    ||       ..||.|.|::
Mouse   197 AKRLRAVHMKEYPDYKYRPRRKTKTLL-------KKDKYSLP----GG-------LLPPGAAAAA 243

  Fly   333 SYTTPTDESTCNSTNQNHGQSTPGGLYEQPLKPTYSPSSVDCYSNADSTEQIESLAANCPPALLN 397
            :.......:           |:|.|:.::  ..||  :.|:.::|...:...|.|....||::  
Mouse   244 AAAAAAAAA-----------SSPVGVGQR--LDTY--THVNGWANGAYSLVQEQLGYAQPPSM-- 291

  Fly   398 ESSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEK--LAKSEEKNKGSQSQGQSQQGIYAAT-Y-PL 458
             |||               .|.|:.....|.:.  |..|.....|:||...:.....||: | .:
Mouse   292 -SSP---------------PPPPALPQMHRYDMAGLQYSPMMPPGAQSYMNAAAAAAAASGYGGM 340

  Fly   459 APTSVAVVAARGMYVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNSTSMRNSISALQQHCNVVTST 523
            ||::.|..||.             :|..      |..:.:....:.:|     :|....:||.|.
Mouse   341 APSAAAAAAAA-------------YGQQ------PATAAAAAAAAAAM-----SLGPMGSVVKSE 381

  Fly   524 PSSSGGTMPTSEMSSYTVSMADNCGNLR--LSMNELSGNEYLP 564
            |||     |...::|:  |.....|:||  :||       |||
Mouse   382 PSS-----PPPAIASH--SQRACLGDLRDMISM-------YLP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 38/70 (54%)
Sox3NP_033263.2 SOX-TCF_HMG-box 143..214 CDD:238684 38/70 (54%)
SOXp 213..306 CDD:289133 31/143 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10270
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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