DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and Sox17

DIOPT Version :10

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_035571.1 Gene:Sox17 / 20671 MGIID:107543 Length:419 Species:Mus musculus


Alignment Length:532 Identity:155/532 - (29%)
Similarity:194/532 - (36%) Gaps:176/532 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 LSHPHAGMVGGGTGQMEDCTSHSPIEAASMWSYDYKGDLCAPNCGYLERHKPLPADLKYR----- 201
            :|.|.||.......|..   |..|...|.:          .| |.:.|...|| .|:|.:     
Mouse     1 MSSPDAGYASDDQSQPR---SAQPAVMAGL----------GP-CPWAESLSPL-GDVKVKGEVVA 50

  Fly   202 ----PGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRR 262
                |.||..::..||||||||||||||||.|||:||.:|||||||:|||||||.|::||..::|
Mouse    51 SSGAPAGTSGRAKAESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKR 115

  Fly   263 PYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSK---------- 317
            |:|||||||||.||.:|||||||||||||.|......||...:...|..|..|.:          
Mouse   116 PFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRVEGGFLHALVEPQAGALGPEGGRVAMDGLG 180

  Fly   318 ---------SNPKLATPPL-----------ATASSSYTTPT-DESTCNSTNQN--------HGQS 353
                     :.|.|.:|.:           |.|...|..|| |.|..:...|:        .|..
Mouse   181 LPFPEPGYPAGPPLMSPHMGPHYRDCQGLGAPALDGYPLPTPDTSPLDGVEQDPAFFAAPLPGDC 245

  Fly   354 TPGGLYEQPLKPTYSPSSVDCYSNADSTEQIESLAANCPPALLNESSPTGGGYDNSLLLKKLTKP 418
            ...|.|      ||:|.|       |....:|      |||     .|...|            |
Mouse   246 PAAGTY------TYAPVS-------DYAVSVE------PPA-----GPMRVG------------P 274

  Fly   419 SPSRAAKSRQEKLAKSEEKNKGSQSQGQSQQGIYAATYPL-----APTSVAVVAARGMYVTCNNR 478
            .||                       |.:..||.|....|     |..|.|..|.||.:.     
Mouse   275 DPS-----------------------GPAMPGILAPPSALHLYYGAMGSPAASAGRGFHA----- 311

  Fly   479 GLLDHGHSVKGTFYPPVSVSEDDNSTSMRNSISALQQHCNVVTSTPSSSGGTMPTSEMSSYTVSM 543
               .....::....||                ...|||.......||.....:|..:        
Mouse   312 ---QPQQPLQPQAPPP----------------PPQQQHPAHGPGQPSPPPEALPCRD-------- 349

  Fly   544 ADNCGNLRLSMNELSG-------NEYLPSANAYGMQYEDFLRYQSND--MDYSTSAVEHKETTSD 599
                |.......||.|       .:|||    :..:.|..|.||.:|  ::.|.|........||
Mouse   350 ----GTESNQPTELLGEVDRTEFEQYLP----FVYKPEMGLPYQGHDCGVNLSDSHGAISSVVSD 406

  Fly   600 SASGQKCLKYPD 611
            ::|......|||
Mouse   407 ASSAVYYCNYPD 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 HMG-box_SoxF 214..289 CDD:438841 58/74 (78%)
PHA03273 305..>391 CDD:223031 23/124 (19%)
Sox17NP_035571.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 8/28 (29%)
HMG-box_SoxF_SOX17 62..142 CDD:438850 60/79 (76%)
Sox17_18_mid 203..253 CDD:463454 11/55 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..356 12/88 (14%)
9aaTAD. /evidence=ECO:0000250|UniProtKB:Q9H6I2 366..374 3/11 (27%)

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