DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and sox10

DIOPT Version :9

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_571950.1 Gene:sox10 / 140616 ZFINID:ZDB-GENE-011207-1 Length:485 Species:Danio rerio


Alignment Length:679 Identity:162/679 - (23%)
Similarity:243/679 - (35%) Gaps:231/679 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 EHSSPSLH-SPAIQSSGYENEHLNEAVLAAHSHSHSPMPMVSSAYVGGGTASGSLINSNIPLLG- 131
            |||...:. ||.:...|               ||.||           |.:||:...::.||.| 
Zfish     5 EHSMSEVEMSPGVSDDG---------------HSMSP-----------GHSSGAPGGADSPLPGQ 43

  Fly   132 -----GGGNSVLNKFLSHPHAGMVGGGTGQMEDCTSHSPI---EAASMWSYDYKGDLCAPNCGYL 188
                 |.|:.         .||:.||.:.:.::.....||   ||.|.....|...|.       
Zfish    44 QSQMSGIGDD---------GAGVSGGVSVKSDEEDDRFPIGIREAVSQVLNGYDWTLV------- 92

  Fly   189 ERHKPLPADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKW 253
                |:|..:.   .|::||    ..::||||||||||:..|:||||:.|.||||:|||.|||.|
Zfish    93 ----PMPVRVN---SGSKSK----PHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLW 146

  Fly   254 RSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKS 318
            |.|...|:||::|||||||..|..::|.|||:|||||..|     ||...::::........|:|
Zfish   147 RLLNETDKRPFIEEAERLRKQHKKDYPEYKYQPRRRKNGK-----PGSSSEADAHSEGEVSHSQS 206

  Fly   319 NPKLATPPLATASSSYTTPTDESTCNSTNQNHGQSTPGGLYEQPLKPTYSPSSVDCYSNADSTEQ 383
            :.|                          ..|.:...||....||...:.|.:            
Zfish   207 HYK--------------------------SLHLEVAHGGAAGSPLGDGHHPHA------------ 233

  Fly   384 IESLAANCPPALLNESSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQSQGQSQ 448
                              ||..:         :.|:|....|:..:.....|.|.:|    |.|:
Zfish   234 ------------------TGQSH---------SPPTPPTTPKTELQGGKSGEGKREG----GASR 267

  Fly   449 QGIYAATYPLAPTSVAVVAARGM-YVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNSTSMRNSISA 512
            .|:...    |..|.|..:|.|. ::...|..:.:..|.|.... .|..|:|.|         ..
Zfish   268 SGLGVG----ADGSSASSSASGKPHIDFGNVDIGEISHDVMANM-EPFDVNEFD---------QY 318

  Fly   513 LQQHCNVVTSTPSSSGGTMPTSEMSSYTVSMADNCGNLRLSMNELSGNEYLPSANAYGMQYEDFL 577
            |..:.:...|..:|:|...|     |||..::.       ::...||                  
Zfish   319 LPPNGHPQASATASAGSAAP-----SYTYGISS-------ALAAASG------------------ 353

  Fly   578 RYQSNDMDYSTSAVEHKETTSDSASGQKCLKYPDTNQNYDDYEAEAYSNAMLPATAASYYTQLPY 642
                    :||:.:..::..|....|.            |..:.:..|....|...|:..:.:.|
Zfish   354 --------HSTAWLSKQQLPSQQHLGA------------DGGKTQIKSETHFPGDTAASGSHVTY 398

  Fly   643 PPTSL----AAFP-----LQLAVPFQQTTSGAYGAQPIQSGYLHYGNYGGYEGMAQSQ------- 691
            .|.:|    :|||     .|.|...:...||:|.|...|:.    |.|..:..|..||       
Zfish   399 TPLTLPHYSSAFPSLASRAQFAEYAEHQASGSYYAHSSQTS----GLYSAFSYMGPSQRPLYTAI 459

  Fly   692 ------PQNQAPVHHQQASHSAPPSLSVP 714
                  ||:.:|.|.:|..::   :||.|
Zfish   460 PDPGSVPQSHSPTHWEQPVYT---TLSRP 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 SOX-TCF_HMG-box 214..285 CDD:238684 43/70 (61%)
sox10NP_571950.1 Sox_N 13..97 CDD:289229 28/129 (22%)
SOX-TCF_HMG-box 107..177 CDD:238684 42/69 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0527
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000028
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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