DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and Sox9

DIOPT Version :10

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_536328.1 Gene:Sox9 / 140586 RGDID:620474 Length:507 Species:Rattus norvegicus


Alignment Length:617 Identity:157/617 - (25%)
Similarity:216/617 - (35%) Gaps:181/617 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 SHSPMPMVSSAYVGGGTASGSLINSNIPLLGGGGNSVLNKFLSHPHAGMVGGGTGQM--EDCTSH 163
            |.:|.|.:|....|....|||            |:...|   :.|.......|...:  |.....
  Rat    19 SGAPSPTMSEDSAGSPCPSGS------------GSDTEN---TRPQENTFPKGEPDLKKESEEDK 68

  Fly   164 SPI---EAASMWSYDYKGDLCAPNCGYLERHKPLPADLKYRPGGTQSKSAKESRIRRPMNAFMVW 225
            .|:   ||.|.....|...|.           |:|.    |..|:   |..:..::|||||||||
  Rat    69 FPVCIREAVSQVLKGYDWTLV-----------PMPV----RVNGS---SKNKPHVKRPMNAFMVW 115

  Fly   226 AKIERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRRK 290
            |:..|:||||:.|.||||:|||.|||.||.|...::||:|||||||||.|..:||:|||:|||||
  Rat   116 AQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK 180

  Fly   291 QSKL-RAMQPGGKEQSESSPN----------------------PG--TGGSKSNPKLATPPLATA 330
            ..|. :|......||:..|||                      ||  :|.|:..|   |||    
  Rat   181 SVKNGQAEAEEATEQTHISPNAIFKALQADSPHSSSGMSEVHSPGEHSGQSQGPP---TPP---- 238

  Fly   331 SSSYTTP-TDESTCNSTNQNHGQSTPGGLYEQPL---KPTYSPSSVDCYSNADSTEQIESLAANC 391
                ||| ||........:..|:....|..:.|:   .......|.|..||.: |..:.......
  Rat   239 ----TTPKTDVQAGKVDLKREGRPLAEGGRQPPIDFRDVDIGELSSDVISNIE-TFDVNEFDQYL 298

  Fly   392 P-------PALLNESSPTGGGYDNSLLLKKLTKPSPSRAAKSRQEKLAKSEEKNKGSQSQGQSQQ 449
            |       ||...:.|.||....:|      |.|:|:.|.   ...::|.:......|...|:.|
  Rat   299 PPNGHPGVPATHGQVSYTGSYGISS------TAPTPATAG---HVWMSKQQAPPPPPQQPPQAPQ 354

  Fly   450 GIYAATYPLAPTSVAVVAARGMYVTCNNRGLLDHGHSVKGTFYPPVSVSEDDNSTSMRNSISALQ 514
            .      |.||.....                           ||            :...:..|
  Rat   355 A------PQAPPQQQA---------------------------PP------------QPQQAPQQ 374

  Fly   515 QHCNVVTSTPSSSGGT----MPTSEMSSYTVSMADNCGNLRLSMNELSGNEYLPSANAYGMQYED 575
            |..:.:|:..|..|.:    :.|.::|....|........::|.:..:...|.||.........|
  Rat   375 QQAHTLTTLSSEPGQSQRTHIKTEQLSPSHYSEQQQHSPQQISYSPFNLPHYNPSYPTITRSQYD 439

  Fly   576 FLRYQSNDMDYSTSAVEHKETTSDSASGQKCLKYPDTNQNYDDYEAEAYSNAMLPATAASYYTQL 640
            :..:|::...||.:|                      .|....|....|.|   ||....|   .
  Rat   440 YTDHQNSGSYYSHAA----------------------GQGSGLYSTFTYMN---PAQRPMY---T 476

  Fly   641 PYPPTSLAAFPLQLAVP-FQQTTSGAYGAQPI 671
            |...||        .|| ..||.|..:..||:
  Rat   477 PIADTS--------GVPSIPQTHSPQHWEQPV 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 HMG-box_SoxF 214..289 CDD:438841 48/74 (65%)
PHA03273 305..>391 CDD:223031 24/113 (21%)
Sox9NP_536328.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..67 13/62 (21%)
Sox_N 22..94 CDD:463586 20/101 (20%)
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P48436 63..103 12/57 (21%)
PQA. /evidence=ECO:0000250|UniProtKB:P48436 63..103 12/57 (21%)
HMG-box_SoxE 104..178 CDD:438840 47/73 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..250 35/100 (35%)
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P48436 224..307 22/94 (23%)
9aaTAD 1. /evidence=ECO:0000250|UniProtKB:P48436 275..284 2/8 (25%)
9aaTAD 2. /evidence=ECO:0000250|UniProtKB:P48436 290..298 0/7 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..429 19/138 (14%)
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P48436 392..507 29/145 (20%)
9aaTAD 3. /evidence=ECO:0000250|UniProtKB:P48436 458..466 1/7 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 477..507 10/32 (31%)

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