DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and sox6

DIOPT Version :10

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_031755685.1 Gene:sox6 / 100144640 XenbaseID:XB-GENE-483934 Length:804 Species:Xenopus tropicalis


Alignment Length:470 Identity:113/470 - (24%)
Similarity:180/470 - (38%) Gaps:155/470 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YPHVSRT--------------PEYSHSTGSDYPEH----------GGYLTDGRLMHESNSDAGIY 62
            :||..||              |..|:..|.:||..          ...|:..:|..       :|
 Frog   300 FPHDQRTLAAAAAAQQGFLFPPGLSYKPGDNYPMQFIPSTMAAAAASGLSPLQLQQ-------LY 357

  Fly    63 HVRQGSEHSSPSLHSP----------AIQSSGYENEH----------------LN--------EA 93
            ..:..|...||....|          .:..:|.::|.                ||        :.
 Frog   358 AAQLASMQVSPGAKIPTTPQPANAPGTLSPTGMKSEKRGTSPVAQIKDEAAQPLNLSARPKTADP 422

  Fly    94 VLAAHSHSHSPMPMVSSAYVGGGTASG----------SLINS-NIPLLGGGGNSVLNKF------ 141
            :.:..|.:.|..|:..::.|.....||          .:::| |.|.|.|..::|:...      
 Frog   423 IKSPTSPTQSFFPVSKTSPVSLSNKSGIPSPIRGPSLDILSSLNSPALFGDQDTVMKAIQEARKM 487

  Fly   142 --------LSHPHA--GMVGGGTGQMEDCTSHSPIEAASMWSYDYKGDLCA----------PNCG 186
                    |..||:  |.:......:.:|.|...:..|      ..|.:|.          .|.|
 Frog   488 REQIQREQLLTPHSIDGKLPINNMGLNNCRSDKMLLDA------VTGKICIRSAHTERTHFENLG 546

  Fly   187 YLERHKPLPADLKYRPG-----------------------GTQSKSAKESRIRRPMNAFMVWAKI 228
            .....|| ..|.|..||                       .|:.:|:.|..|:|||||||||||.
 Frog   547 PQLTGKP-NEDGKLGPGVIDLTRPEDVEGGATVVEARVYRDTRGRSSSEPHIKRPMNAFMVWAKD 610

  Fly   229 ERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQ-- 291
            ||:|:....||:||:::||:||.:|::::.|:::||.||..||..||:.::|||||:||.::.  
 Frog   611 ERRKILQAFPDMHNSNISKILGSRWKAMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCI 675

  Fly   292 ---SKLR------AMQPGGKEQSESSPNPGTGGSKSNPKLATP-----PLATASSSYTTPTDEST 342
               .|||      .|:...:|..:..    |.|.:....::||     | .|.|.:.|||:.:.|
 Frog   676 VDGKKLRIGEYKQLMRSRRQEMRQFF----TVGQQPQIPISTPTGVVYP-GTISMATTTPSPQMT 735

  Fly   343 --CNSTNQNHGQSTP 355
              |:||:.:...|.|
 Frog   736 SDCSSTSASPEPSIP 750

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 HMG-box_SoxF 214..289 CDD:438841 40/74 (54%)
PHA03273 305..>391 CDD:223031 16/58 (28%)
sox6XP_031755685.1 HMG-box_EGL13-like 595..672 CDD:438848 40/76 (53%)

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