DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sox15 and sox10

DIOPT Version :10

Sequence 1:NP_523739.2 Gene:Sox15 / 36575 FlyBaseID:FBgn0005613 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001093691.1 Gene:sox10 / 100101700 XenbaseID:XB-GENE-480304 Length:436 Species:Xenopus tropicalis


Alignment Length:391 Identity:117/391 - (29%)
Similarity:174/391 - (44%) Gaps:77/391 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 PLPADLKYRPGGTQSKSAKESRIRRPMNAFMVWAKIERKKLADENPDLHNADLSKMLGKKWRSLT 257
            |:|..:.   ||::||    ..::||||||||||:..|:||||:.|.||||:|||.|||.||.|.
 Frog    75 PMPVRVN---GGSKSK----PHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLN 132

  Fly   258 PQDRRPYVEEAERLRVIHMTEHPNYKYRPRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSNPKL 322
            ..|:||::|||||||:.|..:||:|||:|||||..|               ||||.|...|.   
 Frog   133 ENDKRPFIEEAERLRMQHKKDHPDYKYQPRRRKNGK---------------PNPGEGDGSSE--- 179

  Fly   323 ATPPLATASSSY----------TTPTDESTCNSTNQNHGQSTPGGLYEQPLKPTYSPSSVD---- 373
            |....|:..:.|          :..:|.::.:|..|:||..||....:..|:...|....|    
 Frog   180 AEGGAASIQAHYKNSHLDHRHGSPMSDGNSEHSAGQSHGPPTPPTTPKTELQAGKSDGKRDGSRS 244

  Fly   374 ---------CYSNADSTEQIESLAANCPPALLNESS----PTG--------GGYDNSLLLKKLTK 417
                     .:.|.|..|....:.||.....:||..    |.|        |||.:|..|.....
 Frog   245 LGEGGKPHIDFGNVDIGEISHDVMANMETFDVNEFDQYLPPNGHAGHPSHIGGYTSSYGLSGALA 309

  Fly   418 PSPS--RAAKSRQEKLAKSEEKNKGSQSQGQSQQGIYAATYPLAPTSVAVVAARGMYVTCNNRGL 480
            ..||  ..||...:..:|::.|.:.|.:...::|   .:|..|..||:. :...|......:|..
 Frog   310 AGPSAWALAKQHPQTDSKAQVKTESSSTSHYTEQ---PSTSQLTYTSLG-LPHYGSAFPSISRPQ 370

  Fly   481 LDHG-HSVKGTFYPPVSVSEDDNSTSMRNSISAL----QQHCNVVTSTPSSSGGTMPTS-EMSSY 539
            .|:. |....::|     |....::|:.::.|.:    :.....::.:||.:....||. |...|
 Frog   371 FDYADHQPSSSYY-----SHSSQASSLYSAFSYMGPPQRPLYTAISDSPSVAQSHSPTHWEQPVY 430

  Fly   540 T 540
            |
 Frog   431 T 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sox15NP_523739.2 HMG-box_SoxF 214..289 CDD:438841 47/74 (64%)
PHA03273 305..>391 CDD:223031 23/108 (21%)
sox10NP_001093691.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55
Sox_N 12..79 CDD:463586 2/3 (67%)
Dimerization (DIM). /evidence=ECO:0000250|UniProtKB:P56693 48..88 6/19 (32%)
HMG-box_SoxE 89..163 CDD:438840 46/73 (63%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..183 22/55 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 195..257 10/61 (16%)
Transactivation domain (TAM). /evidence=ECO:0000250|UniProtKB:P56693 209..295 18/85 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..346 4/26 (15%)
Transactivation domain (TAC). /evidence=ECO:0000250|UniProtKB:P56693 327..436 23/114 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 413..436 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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