DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and SLC38A5

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:XP_005272751.2 Gene:SLC38A5 / 92745 HGNCID:18070 Length:539 Species:Homo sapiens


Alignment Length:470 Identity:98/470 - (20%)
Similarity:183/470 - (38%) Gaps:102/470 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 EYRNEYQSTSFN-----EYDGRYQQTDGFRQGSIASEGSSFV----CEGEGGGGCKIDEFQAAWN 149
            |.|.|.|....|     :..|..|:.:||......:.||..|    .||:...|..:      :|
Human    45 ETRMELQDPKMNGALPSDAVGYRQEREGFLPSRGPAPGSKPVQFMDFEGKTSFGMSV------FN 103

  Fly   150 VTNAIQGMFIVSLPFAVLHGG-YWAIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVRDSYV 213
            ::|||.|..|:.|.:|:.|.| .:.:..::.||.:..|:..:|:.|        ..:..:| :|.
Human   104 LSNAIMGSGILGLAYAMAHTGVIFFLALLLCIALLSSYSIHLLLTC--------AGIAGIR-AYE 159

  Fly   214 AIAKVCFGPKLGARAVSIAQLIEL----LMTCILYVVVCG-DLLAGTY----PQGSFDSRSWMLF 269
            .:.:..|||   |..|.:|.:|.|    .|:..|:::... .|:.||:    |:|.:..:..:|.
Human   160 QLGQRAFGP---AGKVVVATVICLHNVGAMSSYLFIIKSELPLVIGTFLYMDPEGDWFLKGNLLI 221

  Fly   270 V---GIFLLPMGFLKSLKMV---STLSFWCTMSHIVINAVILGYCLLQIG--------------- 313
            :   .:.:||:..:|.|..:   |.||..|.:..:|  :||  |...|:|               
Human   222 IIVSVLIILPLALMKHLGYLGYTSGLSLTCMLFFLV--SVI--YKKFQLGCAIGHNETAMESEAL 282

  Fly   314 --------DWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAA 370
                    :.......|::|.: ...::.::.|::.....:..:...:...||.......:....
Human   283 VGLPSQGLNSSCEAQMFTVDSQ-MSYTVPIMAFAFVCHPEVLPIYTELCRPSKRRMQAVANVSIG 346

  Fly   371 AVF-----KAGFGYICFLTFQNDTQQVITNNLHSQGFKG----MVNFFLVIKALLSYPLPYYAAC 426
            |:|     .|.|||:.|.:      .|....||....|.    .|...:::...|:.|:..:...
Human   347 AMFCMYGLTATFGYLTFYS------SVKAEMLHMYSQKDPLILCVRLAVLLAVTLTVPVVLFPIR 405

  Fly   427 ELLERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTI--LMAIFIPHFSILMGFIGSFTG 489
            ..|::..|              .|:...|.....:.:|:..:  ::.|.:|....:.|.|||.:.
Human   406 RALQQLLF--------------PGKAFSWPRHVAIALILLVLVNVLVICVPTIRDIFGVIGSTSA 456

  Fly   490 TMLSFIWPCYFHIKI 504
            ..|.||.|..|:::|
Human   457 PSLIFILPSIFYLRI 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 83/411 (20%)
SLC38A5XP_005272751.2 SLC5-6-like_sbd 93..484 CDD:294310 85/422 (20%)
SdaC 93..476 CDD:223884 85/422 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158540
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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