DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AT1G67640

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_176932.1 Gene:AT1G67640 / 843088 AraportID:AT1G67640 Length:441 Species:Arabidopsis thaliana


Alignment Length:427 Identity:100/427 - (23%)
Similarity:166/427 - (38%) Gaps:84/427 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 FQAAWNVTNAIQGMFIVSLPFAVLHGGYW--AIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMV 206
            :.|..||| |:.|..::|||:|:.:.| |  .:..|:....|..||...:|| ::|..|.     
plant    35 YSAFHNVT-AMVGAGVLSLPYAMSNLG-WGPGVTIMIMSWLITFYTLWQMVQ-MHEMVPG----- 91

  Fly   207 RVRDSYVAIAKVCFGPKLGARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQGSFDSRS-----W 266
            :..|.|..:.:..||.|||...|...|||..:...|:|:|..|..|...:.....|.::     |
plant    92 KRFDRYHELGQHAFGEKLGLWIVVPQQLIVEVGVDIVYMVTGGKSLKKIHDLLCTDCKNIRTTYW 156

  Fly   267 -MLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGDWGWS---KVRFSIDME 327
             |:|..|..: :..|.:...:|.:|       :....:.|.|..:.   |..|   .|..::|..
plant   157 IMIFASIHFV-LAHLPNFNSISIVS-------LAAAVMSLSYSTIA---WATSVKKGVHPNVDYS 210

  Fly   328 -----------NFPISLGVIVFSYTS-------QIFLPTLEGNMIDRSKFNWMLDW-----SHIA 369
                       ||..:||.:.|:|..       |..:|:..      .|.:.:..|     ::|.
plant   211 SRASTTSGNVFNFLNALGDVAFAYAGHNVVLEIQATIPSTP------EKPSKIAMWKGVVVAYIV 269

  Fly   370 AAVFKAGFGYICFLTFQNDTQQVITNNLHSQ-GFKGMVNFFLVIKALLS---YPLPYYAACE--L 428
            .|:......::|:..|.|.....|...|... ....:.|.|:|:..:.|   |.:|.:...|  |
plant   270 VAICYFPVAFVCYYIFGNSVDDNILMTLEKPIWLIAIANAFVVVHVIGSYQIYAMPVFDMLETFL 334

  Fly   429 LERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLS 493
            :::..|....|.:|.|               |...:..|:.:||.||.|..|:||.|.|.....:
plant   335 VKKMMFAPSFKLRFIT---------------RTLYVAFTMFVAICIPFFGGLLGFFGGFAFAPTT 384

  Fly   494 FIWPCYFHIKIKGHLLDQKEIAKDYLIIGLGVLFGVI 530
            :..||...:.||    ..|:....:.|....::.|||
plant   385 YYLPCIMWLCIK----KPKKYGLSWCINWFCIVVGVI 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 100/427 (23%)
AT1G67640NP_176932.1 Aa_trans 29..425 CDD:279788 100/427 (23%)
SdaC 44..425 CDD:223884 95/417 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D570025at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48017
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X361
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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