DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AAP1

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_176132.1 Gene:AAP1 / 842205 AraportID:AT1G58360 Length:485 Species:Arabidopsis thaliana


Alignment Length:519 Identity:99/519 - (19%)
Similarity:183/519 - (35%) Gaps:113/519 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 SFNEYDGRYQQTDGFRQGSIASEGSSFVCEGEGGGGCKIDE----------FQAAWNVTNAIQGM 157
            |||        |:|... |.|..|.::.......   .:||          ..|:.::..|:.|.
plant     3 SFN--------TEGHNH-STAESGDAYTVSDPTK---NVDEDGREKRTGTWLTASAHIITAVIGS 55

  Fly   158 FIVSLPFAVLHGGYWAIVAMVGI-AHICCYTGKVLVQCLYEPDPATGQMVRVRDSYVAIAKVCFG 221
            .::||.:|:...|:.|..:::.| :.|..:|..:|..|...|||.||:.   ..:|:.:.:    
plant    56 GVLSLAWAIAQLGWIAGTSILLIFSFITYFTSTMLADCYRAPDPVTGKR---NYTYMDVVR---- 113

  Fly   222 PKLGARAV---SIAQLIELLMTCILYVVVCGDLLAGTYPQGSFDSRS-----------WMLFVGI 272
            ..||.|.|   .:||...|:...:.|.:.....|........|..:.           :|...||
plant   114 SYLGGRKVQLCGVAQYGNLIGVTVGYTITASISLVAVGKSNCFHDKGHTADCTISNYPYMAVFGI 178

  Fly   273 FLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLL-----QIGDWGWSKVRFSIDM------ 326
            ..:.:..:.:...:|.||....:.......:.:|..:.     ::|....:.....:|:      
plant   179 IQVILSQIPNFHKLSFLSIMAAVMSFTYATIGIGLAIATVAGGKVGKTSMTGTAVGVDVTAAQKI 243

  Fly   327 -ENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAAAVFKAGFGYIC----FLTFQ 386
             .:|. ::|.|.|:|.....|..::..:......|..:..:.:........|..:|    :..|.
plant   244 WRSFQ-AVGDIAFAYAYATVLIEIQDTLRSSPAENKAMKRASLVGVSTTTFFYILCGCIGYAAFG 307

  Fly   387 NDTQQVITNNLHSQGF------KGMVNFFLVIKALLSYPLPYYAACELLERNFFRGPPKTKFPTI 445
            |:..   .:.|...||      ....|..:.:..:.:|.:......:.:|:...|..|..||.|.
plant   308 NNAP---GDFLTDFGFFEPFWLIDFANACIAVHLIGAYQVFAQPIFQFVEKKCNRNYPDNKFITS 369

  Fly   446 -----------WNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCY 499
                       :|:.....||    |...:|.|.::|:..|.|:.::|.||:     .|| ||..
plant   370 EYSVNVPFLGKFNISLFRLVW----RTAYVVITTVVAMIFPFFNAILGLIGA-----ASF-WPLT 424

  Fly   500 FHIKIKGHLLDQKEIAKDY--------------LIIGLGVLFGVIGIYDSGNALINAFEIGLPF 549
            .:..::.|:...|  .|.|              ||:.|....|.|.      .||::.:...||
plant   425 VYFPVEMHIAQTK--IKKYSARWIALKTMCYVCLIVSLLAAAGSIA------GLISSVKTYKPF 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 85/450 (19%)
AAP1NP_176132.1 Aa_trans 37..472 CDD:279788 86/463 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D570025at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48017
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X361
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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