DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AT1G48640

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_175297.2 Gene:AT1G48640 / 841286 AraportID:AT1G48640 Length:453 Species:Arabidopsis thaliana


Alignment Length:456 Identity:97/456 - (21%)
Similarity:163/456 - (35%) Gaps:115/456 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 QQTDGF----RQGSIASEGSSFVCEGEGGGGCKIDEFQ----------------AAW------NV 150
            |.|||.    .|.|:..               :|||.:                |.|      ||
plant     4 QMTDGVPPPPEQSSLDH---------------RIDELERQKEIDDWLPITSSRNAKWWYSTFHNV 53

  Fly   151 TNAIQGMFIVSLPFAVLHGGYWAIVAMVGIAH-ICCYTGKVLVQCLYEPDPATGQMVRVRDSYVA 214
            | |:.|..::.|||.:...|:...:|::.::. |..||...:|: ::|..|.     :..|.|..
plant    54 T-AMVGAGVLGLPFFMAQLGWGPGIAVLILSWIITLYTLWQMVE-MHEMVPG-----KRFDRYHE 111

  Fly   215 IAKVCFGPKLGARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQGSFDSRSWMLFVGIFLLPMGF 279
            :.:..||.:||...:...|:|..:..||:|:|..|..|...:.....|.....|...|.:    |
plant   112 LGQFAFGERLGLYIIVPQQIIVEVGVCIVYMVTGGQSLKKFHEIACQDCSPIRLSFFIMI----F 172

  Fly   280 LKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIG-------------DWGWSKVRFSIDMENFPI 331
            ..|..::|.|..:.::|.:.:.|.::......|.             .:|:.....:..:.:|..
plant   173 ASSHFVLSHLPNFNSISGVSLVAAVMSLSYSTIAWTATAAKGVQEDVQYGYKSGTTASTVLSFFT 237

  Fly   332 SLGVIVFSYTS-------QIFLPTLEGNMIDRSKFNWMLDWSHIAAA----------VFKAGFGY 379
            .||.|.|:|..       |..:|:...|   .||...   |..:..|          |...|:| 
plant   238 GLGGIAFAYAGHNVVLEIQATIPSTPSN---PSKGPM---WRGVVVAYVVVALCYFPVALVGYG- 295

  Fly   380 ICFLTFQNDTQQVITNNLHSQGFK-GMVNFFLVIKALLSY---PLPYYAACE--LLERNFFRGPP 438
                .|.|.....:..:|.:..:. ...|.|:|:..:.||   .:|.:...|  |:::..|:  |
plant   296 ----VFGNAVLDNVLMSLETPVWAIATANLFVVMHVIGSYQIFAMPVFDMVETFLVKKLNFK--P 354

  Fly   439 KTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIK 503
            .|....|             .|...:..|:.:.|.||.|..|:.|.|.|.....|:..||...:.
plant   355 STVLRFI-------------VRNVYVALTMFIGIMIPFFGGLLAFFGGFAFAPTSYFLPCIMWLL 406

  Fly   504 I 504
            |
plant   407 I 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 88/420 (21%)
AT1G48640NP_175297.2 Aa_trans 41..437 CDD:279788 88/404 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D570025at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48017
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X361
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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