DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AT1G47670

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_175198.1 Gene:AT1G47670 / 841177 AraportID:AT1G47670 Length:519 Species:Arabidopsis thaliana


Alignment Length:467 Identity:109/467 - (23%)
Similarity:169/467 - (36%) Gaps:133/467 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 AAWNVTNAIQGMFIVSLP--FAVLHGGYWAIVAMVGIAHIC--CYTGKVLVQCLYEPDPATGQMV 206
            ||::..||..|...:.||  ||.| |..|.|:::. ||: |  .||..:||| |:|..|.     
plant   101 AAFHNLNAGVGFQALVLPVAFAFL-GWSWGILSLT-IAY-CWQLYTLWILVQ-LHEAVPG----- 156

  Fly   207 RVRDSYVAIAKVCFGPKLG------------ARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQG 259
            :..:.||.:|:..||.:||            |...:...||......:.:.:|||.|..    ..
plant   157 KRYNRYVELAQAAFGERLGVWLALFPTVYLSAGTATALILIGGETMKLFFQIVCGPLCT----SN 217

  Fly   260 SFDSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGDWGW----SKV 320
            ...:..|.|......:.:..|.:|..::.||....::.|..:.::            |    |:.
plant   218 PLTTVEWYLVFTSLCIVLSQLPNLNSIAGLSLIGAVTAITYSTMV------------WVLSVSQP 270

  Fly   321 R-FSIDMENFPIS--------------LGVIVFSYTSQIFLPTLEGNMIDRSKF-----NW---M 362
            | .:|..|  |:|              ||:|.|::.....:..::..|....|.     .|   .
plant   271 RPATISYE--PLSMPSTSGSLFAVLNALGIIAFAFRGHNLVLEIQSTMPSTFKHPAHVPMWRGAK 333

  Fly   363 LDWSHIAAAVFKAGFGYICFLTFQNDTQQVITNNLHSQGFKGMV------------------NFF 409
            :.:..||..:|....|  .|..:         .||...|  ||:                  .|.
plant   334 ISYFLIALCIFPISIG--GFWAY---------GNLMPSG--GMLAALYAFHIHDIPRGLLATAFL 385

  Fly   410 LVIKALLS----YPLPYYAACELLERNFFRGPPKTKFP-TIWNLDGELKVWGLGFRVGVIVSTIL 469
            ||:.:.||    |.:|   |.:..|..:   ..:|..| :||...        ||||.....:..
plant   386 LVVFSCLSSFQIYSMP---AFDSFEAGY---TSRTNKPCSIWVRS--------GFRVFFGFVSFF 436

  Fly   470 MAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIKIKGHLLDQKEIAKDYLIIGLGVLFGVIGIYD 534
            :.:.:|..|.|.|.:|..| ..::|.:||:..:.||   ...|.....|...|||.|        
plant   437 IGVALPFLSSLAGLLGGLT-LPVTFAYPCFMWVLIK---KPAKYSFNWYFHWGLGWL-------- 489

  Fly   535 SGNALINAFEIG 546
             |.|...||.||
plant   490 -GVAFSLAFSIG 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 103/452 (23%)
AT1G47670NP_175198.1 SLC5-6-like_sbd 94..507 CDD:444915 109/467 (23%)

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