DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VGAT and AAP5

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_175076.2 Gene:AAP5 / 841013 AraportID:AT1G44100 Length:480 Species:Arabidopsis thaliana


Alignment Length:534 Identity:111/534 - (20%)
Similarity:201/534 - (37%) Gaps:153/534 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 EYQSTSFNEYDGRYQQTDGFRQGSIASEGSSFVCEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSL 162
            ::.|.||:: |||.::|     |::                     :.|:.::..|:.|..::||
plant    14 KHSSDSFDD-DGRPKRT-----GTV---------------------WTASAHIITAVIGSGVLSL 51

  Fly   163 PFAVLHGGYW--AIVAMVGIAHICCYTGKVLVQCLYEPDPATGQ-----MVRVRDSYVAI-AKVC 219
            .:||...| |  ..|||:..:.:..||..:|..|....|..||:     |..:..:...| .|||
plant    52 AWAVAQIG-WIGGPVAMLLFSFVTFYTSTLLCSCYRSGDSVTGKRNYTYMDAIHSNLGGIKVKVC 115

  Fly   220 --------FGPKLGARAVSIAQLIELLMTCI---------------LYVVVCG--DLLAGTYPQG 259
                    ||..:|....|...|:.:..|..               :|::..|  .::....|  
plant   116 GVVQYVNLFGTAIGYTIASAISLVAIQRTSCQQMNGPNDPCHVNGNVYMIAFGIVQIIFSQIP-- 178

  Fly   260 SFDSRSWMLFVGIFLLPMGFLKSL--------KMVSTLSFWCTMSHIVINAVILGYCLLQIGDWG 316
            .||...|:..|...   |.|..|.        |:|.......:::.:.:..|.|.          
plant   179 DFDQLWWLSIVAAV---MSFAYSAIGLGLGVSKVVENKEIKGSLTGVTVGTVTLS---------- 230

  Fly   317 WSKVRFSIDMENFPISLGVIVFSYTSQIFL---------PTLEGNMIDRSKFNWMLDWSHIAAAV 372
             ..|..|..:.....|||.|.|:|:..:.|         |..|.|.:.::.|     .|.....|
plant   231 -GTVTSSQKIWRTFQSLGNIAFAYSYSMILIEIQDTVKSPPAEVNTMRKATF-----VSVAVTTV 289

  Fly   373 FKAGFGYICFLTFQNDTQQVITNNLHSQGFKG------MVNFFLVIKALLSYPL---PYYAACEL 428
            |....|.:.:..|.::..   .|.|...||:.      :.|..:||..:.:|.:   |.:|   .
plant   290 FYMLCGCVGYAAFGDNAP---GNLLAHGGFRNPYWLLDIANLAIVIHLVGAYQVYCQPLFA---F 348

  Fly   429 LERNFFRGPPKTKFPT----IWNLDGE---LKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGS 486
            :|:...|..|:::|.|    |....|:   |.::.|.:|...:::|.|:::.:|.|:.::|.:|:
plant   349 VEKEASRRFPESEFVTKEIKIQLFPGKPFNLNLFRLVWRTFFVMTTTLISMLMPFFNDVVGLLGA 413

  Fly   487 FTGTMLSFIWP--CYFHIKIKGHLLDQKEIAK-------------DYLIIGLGVLFG-VIGIYDS 535
                 :.| ||  .||.:::   .:.||.:.:             ..|.:.:....| ||||   
plant   414 -----IGF-WPLTVYFPVEM---YIAQKNVPRWGTKWVCLQVLSVTCLFVSVAAAAGSVIGI--- 466

  Fly   536 GNALINAFEIGLPF 549
                ::..::..||
plant   467 ----VSDLKVYKPF 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 100/470 (21%)
AAP5NP_175076.2 Aa_trans 28..468 CDD:279788 103/509 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D570025at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48017
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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