DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AAP6

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_199774.1 Gene:AAP6 / 835025 AraportID:AT5G49630 Length:481 Species:Arabidopsis thaliana


Alignment Length:483 Identity:101/483 - (20%)
Similarity:168/483 - (34%) Gaps:137/483 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 SFNEYDGRYQQTDGFRQGSIASEGSSFVCEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVL 167
            :|:| |||.::|..:..||.                          ::..|:.|..::||.:|:.
plant    24 NFDE-DGRDKRTGTWMTGSA--------------------------HIITAVIGSGVLSLAWAIA 61

  Fly   168 HGGYWAIVA-MVGIAHICCYTGKVLVQCLYEPDPATGQMVRVRDSYVAIAKVCFGPKLGARAV-- 229
            ..|:.|..| ::..:.|..:|..:|..|...|||.||:.   ..:|:.:.:    ..||.|.|  
plant    62 QLGWVAGPAVLMAFSFITYFTSTMLADCYRSPDPVTGKR---NYTYMEVVR----SYLGGRKVQL 119

  Fly   230 -SIAQLIELLMTCILYVVVCGDLLAGTYPQGSFDSRSWML--------FVGIFLLPMGFLKSLKM 285
             .:||...|:...|.|.:.....:........|......:        |:.||.:....|..:..
plant   120 CGLAQYGNLIGITIGYTITASISMVAVKRSNCFHKNGHNVKCATSNTPFMIIFAIIQIILSQIPN 184

  Fly   286 VSTLSFWCTMSHIVINAVILGYCLLQIG--------DWGWSKVRFSIDMENFPI----------- 331
            ...|| |     :.|.|.::.:|...||        ..|...||.::......|           
plant   185 FHNLS-W-----LSILAAVMSFCYASIGVGLSIAKAAGGGEHVRTTLTGVTVGIDVSGAEKIWRT 243

  Fly   332 --SLGVIVFSYTSQIFL----------PTLEGNMIDRSK--------FNWMLDWSHIAAAVFKAG 376
              ::|.|.|:|.....|          |..|...:.|:.        |.:||             
plant   244 FQAIGDIAFAYAYSTVLIEIQDTLKAGPPSENKAMKRASLVGVSTTTFFYML------------- 295

  Fly   377 FGYICFLTFQNDTQQVITNNLHSQGFK------GMVNFFLVIKALLSYPLPYYAACELLERNFFR 435
            .|.:.:..|.||..   .|.|...||.      ...|..:.:..:.:|.:......:.:|....:
plant   296 CGCVGYAAFGNDAP---GNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFCQPIFQFVESQSAK 357

  Fly   436 GPPKTKFPTIWNLDGELKV-------WGLGF-----RVGVIVSTILMAIFIPHFSILMGFIGSFT 488
            ..|..||.|     ||.|:       :.:.|     |...:|.|.::|:..|.|:..:|.||:  
plant   358 RWPDNKFIT-----GEYKIHVPCCGDFSINFLRLVWRTSYVVVTAVVAMIFPFFNDFLGLIGA-- 415

  Fly   489 GTMLSFIWPCYFHIKIKGHLLDQKEIAK 516
               .|| ||...:..|:.|:. ||:|.|
plant   416 ---ASF-WPLTVYFPIEMHIA-QKKIPK 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 93/442 (21%)
AAP6NP_199774.1 Aa_trans 33..470 CDD:279788 96/473 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D570025at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48017
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X361
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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