DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and LAX1

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_195744.1 Gene:LAX1 / 831866 AraportID:AT5G01240 Length:488 Species:Arabidopsis thaliana


Alignment Length:468 Identity:81/468 - (17%)
Similarity:131/468 - (27%) Gaps:194/468 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 EGEGGGGCKIDEF----QAAWN-----VTNAIQGMFIVSLPFA-------------VLHG--GYW 172
            :|.||.|..:..|    .:||:     .:|.: ...:::||::             :.:|  |.|
plant    34 DGNGGNGFSMKSFLWHGGSAWDAWFSCASNQV-AQVLLTLPYSFSQLGMLSGILLQIFYGLMGSW 97

  Fly   173 AIVAMVGIAHICCYTGKVLVQCLY-------EPDPATG------QMVRVRDSYVAIAKVCFGPKL 224
            .               ..|:..||       |...|..      |...|.|..:       ||..
plant    98 T---------------AYLISVLYVEYRARMEKQEAKSFKNHVIQWFEVLDGLL-------GPYW 140

  Fly   225 GARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQGSFDSRSWMLFVGIFLLPMGFLKSLKMVSTL 289
            .|..::. ....||...::.::.|...:  .|.....|.|:|....|.......|:.|.......
plant   141 KAAGLAF-NCTFLLFGSVIQLIACASNI--YYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIW 202

  Fly   290 SFWCTMSHIVINAVILGYCLLQIGDWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMI 354
            ||                                         ||:.:.:||:            
plant   203 SF-----------------------------------------LGLGMTTYTA------------ 214

  Fly   355 DRSKFNWMLDWSHIAAAVFKAGFGYICFLTFQNDTQQVI-----TNNLHSQG------------- 401
                  |.|.   ||:.:.....|    :|....|:.|:     ||.|::.|             
plant   215 ------WYLT---IASFLHGQAEG----VTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMW 266

  Fly   402 ----FKG---MVNFFLVIKALLSYPLPYYAACELL--ERNFFRGPPKTKFPT------------- 444
                ||.   |...::....|.|....|:|..:.|  ..|.|...|||:|..             
plant   267 KPRKFKSIYLMATLYVFTLTLPSASAVYWAFGDQLLNHSNAFSLLPKTRFRDTAVILMLIHQFIT 331

  Fly   445 ----------IWNLDGELKVWGLG----------FRVGVIVSTILMAIFIPHFSILMGFIGSFTG 489
                      :|.     |..|:.          .|:.|:|....:||..|.|..:...:|:...
plant   332 FGFACTPLYFVWE-----KAIGMHHTKSLCLRALVRLPVVVPIWFLAIIFPFFGPINSAVGALLV 391

  Fly   490 TMLSFIWPCYFHI 502
            |...:|.|...|:
plant   392 TFTVYIIPALAHM 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 77/456 (17%)
LAX1NP_195744.1 PLN03074 1..474 CDD:215559 81/468 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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