DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and LAX1

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_195744.1 Gene:LAX1 / 831866 AraportID:AT5G01240 Length:488 Species:Arabidopsis thaliana


Alignment Length:468 Identity:81/468 - (17%)
Similarity:131/468 - (27%) Gaps:194/468 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 EGEGGGGCKIDEF----QAAWN-----VTNAIQGMFIVSLPFA-------------VLHG--GYW 172
            :|.||.|..:..|    .:||:     .:|.: ...:::||::             :.:|  |.|
plant    34 DGNGGNGFSMKSFLWHGGSAWDAWFSCASNQV-AQVLLTLPYSFSQLGMLSGILLQIFYGLMGSW 97

  Fly   173 AIVAMVGIAHICCYTGKVLVQCLY-------EPDPATG------QMVRVRDSYVAIAKVCFGPKL 224
            .               ..|:..||       |...|..      |...|.|..:       ||..
plant    98 T---------------AYLISVLYVEYRARMEKQEAKSFKNHVIQWFEVLDGLL-------GPYW 140

  Fly   225 GARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQGSFDSRSWMLFVGIFLLPMGFLKSLKMVSTL 289
            .|..::. ....||...::.::.|...:  .|.....|.|:|....|.......|:.|.......
plant   141 KAAGLAF-NCTFLLFGSVIQLIACASNI--YYINDRLDKRTWTYIFGACCATTVFIPSFHNYRIW 202

  Fly   290 SFWCTMSHIVINAVILGYCLLQIGDWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMI 354
            ||                                         ||:.:.:||:            
plant   203 SF-----------------------------------------LGLGMTTYTA------------ 214

  Fly   355 DRSKFNWMLDWSHIAAAVFKAGFGYICFLTFQNDTQQVI-----TNNLHSQG------------- 401
                  |.|.   ||:.:.....|    :|....|:.|:     ||.|::.|             
plant   215 ------WYLT---IASFLHGQAEG----VTHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMW 266

  Fly   402 ----FKG---MVNFFLVIKALLSYPLPYYAACELL--ERNFFRGPPKTKFPT------------- 444
                ||.   |...::....|.|....|:|..:.|  ..|.|...|||:|..             
plant   267 KPRKFKSIYLMATLYVFTLTLPSASAVYWAFGDQLLNHSNAFSLLPKTRFRDTAVILMLIHQFIT 331

  Fly   445 ----------IWNLDGELKVWGLG----------FRVGVIVSTILMAIFIPHFSILMGFIGSFTG 489
                      :|.     |..|:.          .|:.|:|....:||..|.|..:...:|:...
plant   332 FGFACTPLYFVWE-----KAIGMHHTKSLCLRALVRLPVVVPIWFLAIIFPFFGPINSAVGALLV 391

  Fly   490 TMLSFIWPCYFHI 502
            |...:|.|...|:
plant   392 TFTVYIIPALAHM 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 77/456 (17%)
LAX1NP_195744.1 PLN03074 1..474 CDD:215559 81/468 (17%)

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