DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AT5G02180

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_195838.2 Gene:AT5G02180 / 831862 AraportID:AT5G02180 Length:550 Species:Arabidopsis thaliana


Alignment Length:424 Identity:107/424 - (25%)
Similarity:190/424 - (44%) Gaps:67/424 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 QAAWNVTNAIQGMFIVSLPFAVLHGGYWAIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVR 209
            |:..|.||.:.|:.::::|:|:...|:..:..::....|.||||.::.:|| |..|..       
plant   163 QSVLNGTNVLCGLGLITMPYAIKESGWLGLPILLFFGVITCYTGVLMKRCL-ESSPGI------- 219

  Fly   210 DSYVAIAKVCFGPKLGARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQGSFDSRS--------- 265
            .:|..|.:..|| ..|...:||...:||...|:.|:::..|.|:|.:|..|....|         
plant   220 QTYPDIGQAAFG-ITGRFIISILLYVELYAACVEYIIMMSDNLSGLFPNVSLSIASGISLDSPQI 283

  Fly   266 WMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIG---DWGWSKVRFSIDME 327
            :.:...:.:||..:||.|.::|.||...     |:.:::||.||..:|   ..|:.......|:.
plant   284 FAILTTLLVLPTVWLKDLSLLSYLSVGG-----VLASILLGICLFWVGAVDGIGFHATGRVFDLS 343

  Fly   328 NFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWML-------DWSHIAAAVFKAGFGYIC-FLT 384
            |.|:::|:..|.|:.....|.:..:|.|.|:|..:|       ...:||.||        | :..
plant   344 NLPVTIGIFGFGYSGHSVFPNIYSSMKDPSRFPLVLVICFSFCTVLYIAVAV--------CGYTM 400

  Fly   385 FQNDTQQVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYAACELLERNFFRGPPKTKFPTIWNLD 449
            |....:...|.|:....|...|   .|..|::: |:..||.              |..|.:.:|:
plant   401 FGEAVESQFTLNMPKHFFPSKV---AVWTAVIT-PMTKYAL--------------TITPIVMSLE 447

  Fly   450 -----GELKVWGLG--FRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIKIKGH 507
                 .:::..|:.  ||..::.||:::|:.:|.|:|:...||||...:::.|:||..::.|...
plant   448 ELIPTAKMRSRGVSILFRTMLVTSTLVVALSVPFFAIVAALIGSFLAMLVALIFPCLCYLSILKG 512

  Fly   508 LLDQKEIAKDYLIIGLGVLFGVIGIYDSGNALIN 541
            .|...:|.....||..||:.|..|.|.:.:.|.|
plant   513 KLSNTQIGLCIFIIVFGVVSGCCGTYSAISRLAN 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 104/414 (25%)
AT5G02180NP_195838.2 SLC5-6-like_sbd 160..542 CDD:444915 105/418 (25%)

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