DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AT5G16740

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_197176.1 Gene:AT5G16740 / 831537 AraportID:AT5G16740 Length:426 Species:Arabidopsis thaliana


Alignment Length:442 Identity:99/442 - (22%)
Similarity:178/442 - (40%) Gaps:77/442 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 ASEGSSFVCEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVLHGGYWAIVAMVGIAHICCYT 187
            |||.|||:              .:..|:...:.|:..:|:|:||..||:.:|..::....:..||
plant    29 ASENSSFL--------------HSVINMVGMLIGLGQLSMPYAVESGGWMSIFLLISFGILTTYT 79

  Fly   188 GKVLVQCLYEPDPATGQMVRVRDSYVAIAKVCFGPKLGARAVSIAQLIELLMTCILYVVVCGDLL 252
            ..:|.:|: ..:|.:       .||..|....|| :.|...|.:...:|:.|..:.|.:...|.:
plant    80 SHILGKCI-RRNPKS-------KSYSDIGYSAFG-RHGRLIVCLFIYLEIFMALVSYTISLHDNI 135

  Fly   253 AGTYP-----QGSFDSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILG---YCL 309
            :..:|     .|.|.:...........||..:::.|..:|.||    ...|:::|:|.|   |..
plant   136 SAAFPATFSNHGHFPAAKLTAVAVAIALPSLWIRDLSSISFLS----SGGILMSAIIFGSVVYTA 196

  Fly   310 LQIG--DWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAAAV 372
            :..|  |.|...|   :.:||.|...|:.:||:...|..|.|..:|.|.|||..:   |.::.|.
plant   197 IFGGVIDDGKIPV---LRLENIPTVSGIYLFSFGGHIVFPNLYTSMKDPSKFTKV---SIVSFAT 255

  Fly   373 FKAGFGYICF-------------LTFQNDTQQVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYA 424
            ..|.:|.:..             :|.......|:|.         :..:..|:..:..|.|.:..
plant   256 VTALYGALAITGAKMFGPSVNSQITLSLPKHLVVTK---------IALWATVLTPMTKYALEFAP 311

  Fly   425 ACELLERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTIL-MAIFIPHFSILMGFIGSFT 488
            ....|||:.    |.|       :....|:...|.....::..|| :|:.:|:|..::...||..
plant   312 LAIQLERSL----PST-------MTDRTKLVARGLMGSALLLVILALALTVPYFGYVLSLTGSLV 365

  Fly   489 GTMLSFIWPCYFHIKIKGHLLDQKEIAKDYLIIGLGVLFGVIGIYDSGNALI 540
            ...::...|..|::||....:.:...|.:...:.||.:.||:|.::|...|:
plant   366 SVTIAVTLPSAFYLKICWDGMTKFTRAANLGFVVLGCVLGVLGSFESSKLLV 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 91/412 (22%)
AT5G16740NP_197176.1 SLC5-6-like_sbd 32..409 CDD:444915 93/429 (22%)

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