DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AT5G15240

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_197028.1 Gene:AT5G15240 / 831376 AraportID:AT5G15240 Length:423 Species:Arabidopsis thaliana


Alignment Length:436 Identity:99/436 - (22%)
Similarity:192/436 - (44%) Gaps:69/436 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 IDEFQAAWNVT---------NAIQGMFIVSLPFAVLHGGYWAIVAMVGIAHICCYTGKVLVQCLY 196
            :|::....|.:         ||:.|:.|:|:|:|:..||:.:::.:..:|....|...::.:|: 
plant    24 LDDYNPQGNTSFSKTCFHGINALSGVGILSVPYALASGGWLSLIILFTVAITTFYCAILIKRCM- 87

  Fly   197 EPDPATGQMVRVRDSYVAIAKVCFGPKLGARAVSIAQLIELLMTCILYVVVCGDLL--------- 252
            |.||    ::|   ||..|....|| ..|...|||...:||.:....::::.||.|         
plant    88 EMDP----LLR---SYPDIGYKAFG-NTGRVIVSIFMNLELYLVATSFLILEGDNLNKLFSNVGL 144

  Fly   253 --AGTYPQGSFDSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGDW 315
              .|...||   .:.:::.|.:.:||..:|.:::::|.:|    .|.:..:.|||. .:..:|  
plant   145 NFMGLEFQG---KQMFIIMVALIILPSVWLDNMRILSYVS----ASGVFASGVILA-SIFSVG-- 199

  Fly   316 GWSKVRF-SIDMENFPI-----SLGVIVFSYTSQIFLPTLEGNMIDRSKF-NWMLDWSHIAAAVF 373
            .:..|.| :.|.|.|.:     |:.:..|.|.:....|||..:|.::.:| |.|:....|...::
plant   200 AFEGVGFKNNDSEVFRLNGVATSVSLYAFCYCAHPVFPTLYTSMKNKRQFSNVMIICFTICTFIY 264

  Fly   374 KAGFGYICFLTFQNDTQQVITNNLHSQGFKGMVNFF-LVIKALLSYPLPYYAACELLERNFFRGP 437
             |....:.:|.:.:|.:..||.||.:......|..: .::..:..:.|......:.:...|.|..
plant   265 -ASVAVLGYLMYGSDVESQITLNLPTDKLSSKVAIWTTLVNPIAKFALMVTPIIDAMRSRFSRVL 328

  Fly   438 PKTKFPTIWNLDGELKVWGLGFRVGVIV--STILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYF 500
            |..:              ..||.:..|:  |.:::|:.:|.|..||..:|:|.....|.|.||..
plant   329 PNKR--------------ASGFLLSTILVTSNVIVALLLPFFGDLMSLVGAFLSASASVILPCLC 379

  Fly   501 HIKIKGHLLDQKEIAKDYLIIGL---GVLFGVIGIYDSGNALINAF 543
            ::||.|..  |:...:..::||:   |::..:.|.|.:...:...|
plant   380 YLKISGKY--QRLGFETLVLIGITLTGIVVVITGTYQAVKDIFGRF 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 96/421 (23%)
AT5G15240NP_197028.1 SLC5-6-like_sbd 31..416 CDD:444915 97/420 (23%)

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