DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AT3G01760

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_186825.2 Gene:AT3G01760 / 821086 AraportID:AT3G01760 Length:455 Species:Arabidopsis thaliana


Alignment Length:417 Identity:96/417 - (23%)
Similarity:168/417 - (40%) Gaps:61/417 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 FQAAWNVTNAIQGMFIVSLPFAVLHGGYW--AIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMV 206
            :.|..||| ||.|..::.||:|:...| |  .:|.::....|..||   |.|.:...:...||..
plant    38 YSAFHNVT-AIVGAGVLGLPYAMSELG-WGPGVVVLILSWVITLYT---LWQMIEMHEMFEGQRF 97

  Fly   207 RVRDSYVAIAKVCFGPKLGARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQGSFD-SRSWMLFV 270
               |.|..:.:..||.|||...:...||:..:..||:|:|..|..|...:.....| .:...|.:
plant    98 ---DRYHELGQAAFGKKLGLYIIVPLQLLVEISVCIVYMVTGGKSLKNVHDLALGDGDKCTKLRI 159

  Fly   271 GIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIG--------------DWGWSKVR 321
            ..|:|.  |..|..::|.|..:.::|.:.:.|.::......|.              ::|:.|..
plant   160 QHFILI--FASSQFVLSLLKNFNSISGVSLVAAVMSVSYSTIAWVASLRKGATTGSVEYGYRKRT 222

  Fly   322 FSIDMENFPISLGVIVFSYTS-------QIFLPTLEGNMIDRSKFNWMLDWSHIAAAVFKAGFGY 379
            .|:.:. |..:||.:.|:|..       |..:|:...|...|..      |.....|.....|.|
plant   223 TSVPLA-FLSALGEMAFAYAGHNVVLEIQATIPSTPENPSKRPM------WKGAVVAYIIVAFCY 280

  Fly   380 -----ICFLTFQNDTQQVITNNLHSQGFKGMV-NFFLVIKALLSYPLPYYAACELLERNFFRGPP 438
                 :.|.||.|..::.|..:|.......:| |.|:||..|.||.:......:::|....|   
plant   281 FPVALVGFKTFGNSVEESILESLTKPTALVIVANMFVVIHLLGSYQVYAMPVFDMIESVMIR--- 342

  Fly   439 KTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIK 503
                  ||:. ...:|.....|...:.:|:.:|:.:|::|.|:.|.|.|.....::..||...:.
plant   343 ------IWHF-SPTRVLRFTIRWTFVAATMGIAVGLPYYSALLSFFGGFVFAPTTYFIPCIMWLI 400

  Fly   504 IKGHLLDQKEIAKDYLIIGLGVLFGVI 530
            :|    ..|..:..:.:....::||::
plant   401 LK----KPKRFSLSWCMNWFCIIFGLV 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 96/417 (23%)
AT3G01760NP_186825.2 Aa_trans 32..431 CDD:279788 96/417 (23%)

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