DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VGAT and ANT1

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_187796.1 Gene:ANT1 / 820363 AraportID:AT3G11900 Length:432 Species:Arabidopsis thaliana


Alignment Length:428 Identity:90/428 - (21%)
Similarity:176/428 - (41%) Gaps:49/428 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 EGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVLHGGYWA---IVAMVGIAHICCYTGKVLVQCL 195
            |..||.:....|...|:..:|.|..::.||:|....|:.|   .|.:||.|...|..  :|:||.
plant    24 ETTGGDRTSALQTLGNIIVSIVGTGVLGLPYAFRIAGWLAGSLGVIIVGFATYYCML--LLIQCR 86

  Fly   196 YEPDPATGQMVRVRDSYVAIAKVCFGPKLGARAVSIAQLIELLMTC---ILYVVVCGDLLAGTYP 257
            .:.:...|:  ....:|..:...|    :|.:...:.:.:.....|   :.|:|..|..|:..:.
plant    87 DKLESEEGE--EESKTYGDLGFKC----MGTKGRYLTEFLIFTAQCGGSVAYLVFIGRNLSSIFS 145

  Fly   258 QGSFDSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQI--GDWGWS-K 319
            .......|::|.:....:.:.::.||..:|..|.:..:.:|:....::...:..:  ||:.:| :
plant   146 SYGLSMVSFILILVPIEVGLSWITSLSALSPFSIFADICNIIAMCFVVKENVEMVIEGDFSFSDR 210

  Fly   320 VRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAAAVFKAG-------F 377
            ...|..:...|.:.||.||.:........||.:|.:|..|..:|       |...||       |
plant   211 TAISSTIGGLPFAGGVAVFCFEGFAMTLALESSMREREAFPKLL-------AKVLAGITFVYVLF 268

  Fly   378 GYICFLTFQNDTQQVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYAACELLERNFFRGPPKTKF 442
            |:..::.:.:.|:.:||.||.:......|...|.:....::|:..:...|::|:...|       
plant   269 GFCGYMAYGDQTKDIITLNLPNNWSAIAVQIGLCVGLTFTFPIMVHPLNEIIEQKLKR------- 326

  Fly   443 PTIW---------NLDGELKVWGL-GFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWP 497
             ..|         |..|.:..:.: ..|..::|....:|..:|.|......:||....::||:.|
plant   327 -IDWLQKHHNGYSNETGSVSKFAIFTTRTLLVVGLAAIASLVPGFGTFASLVGSTLCALISFVLP 390

  Fly   498 CYFHIKIKGHLLDQKEIAKDYLIIGLGVLFGVIGIYDS 535
            ..:|:.:.|..|:....:.|..|:..|::|.|.|.|::
plant   391 ASYHLTLLGPSLNVWNKSIDVFIVICGLIFAVYGTYNT 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 86/414 (21%)
ANT1NP_187796.1 Aa_trans 29..430 CDD:279788 87/423 (21%)

Return to query results.
Submit another query.