DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AT3G09330

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_187544.2 Gene:AT3G09330 / 820089 AraportID:AT3G09330 Length:524 Species:Arabidopsis thaliana


Alignment Length:434 Identity:100/434 - (23%)
Similarity:188/434 - (43%) Gaps:81/434 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 QAAWNVTNAIQGMFIVSLPFAVLHGGYWAIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVR 209
            |:..|..|.:.|:.::::|:||..||:..:..::..|.|.||||.:|.:||.......       
plant   138 QSVLNGINVLCGISLLTMPYAVKEGGWLGLCILLSFAIITCYTGILLKRCLESSSDLR------- 195

  Fly   210 DSYVAIAKVCFGPKLGARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQ-------GSFDS-RSW 266
             :|..|.:..|| ..|...:||...:||.:.|:.|:::..|.|:..:|.       .|.|| :.:
plant   196 -TYPDIGQAAFG-FTGRLIISILLYMELYVCCVEYIIMMSDNLSRVFPNITLNIVGVSLDSPQIF 258

  Fly   267 MLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQIGD---WGWSKVRFSIDMEN 328
            .:...:.:||..:||.|.::|.||     :..|..:::|..||..:|.   .|:.....|:|:.|
plant   259 AISATLIVLPTVWLKDLSLLSYLS-----AGGVFVSILLALCLFWVGSVDGVGFHTGGKSLDLAN 318

  Fly   329 FPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAAAVFKAGFGY---------IC-FL 383
            .|:::|:..|.::....||::..:|.:.|||          ..|....||:         || :.
plant   319 LPVAIGIFGFGFSGHAVLPSIYSSMKEPSKF----------PLVLLISFGFCVFFYIVVAICGYS 373

  Fly   384 TFQNDTQQVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYAACELLERNFFRGPPKTKF-----P 443
            .|....|...|.|:..|.....:..:..:..                       |.||:     |
plant   374 MFGEAIQSQFTLNMPQQYTASKIAVWTAVVV-----------------------PMTKYALALTP 415

  Fly   444 TIWNLD------GELKVWGLG--FRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYF 500
            .:..|:      .:::.:|:.  .:..:::||:::|:..|.|:|:...:|||...::.||:||..
plant   416 IVLGLEELMLPSEKMRSYGVSIFIKTILVLSTLVVALTFPFFAIMGALMGSFLAMLVDFIFPCLC 480

  Fly   501 HIKIKGHLLDQKEIAKDYLIIGLGVLFGVIGIYDSGNALINAFE 544
            ::.|....|.:.:|.....||..|::.|..|.|.:...|:...:
plant   481 YLSILKGRLSKTQIGICVFIIISGIVSGCCGTYSAIGRLVGKLD 524

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 98/421 (23%)
AT3G09330NP_187544.2 SLC5-6-like_sbd 135..507 CDD:444915 96/415 (23%)

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