DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AT2G41190

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_030664.1 Gene:AT2G41190 / 818718 AraportID:AT2G41190 Length:536 Species:Arabidopsis thaliana


Alignment Length:437 Identity:109/437 - (24%)
Similarity:189/437 - (43%) Gaps:44/437 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 QGSIASEGSSFVCEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVLHGGYWAIVAMVGIAHI 183
            :||.|.|...      ||.||.:  .|..:|..|.:.|:.::|.|:.|...|:.::|.::..|.|
plant   133 KGSFAEELPI------GGYGCSV--IQTIFNAINVMAGVGLLSTPYTVKEAGWASMVILLLFAVI 189

  Fly   184 CCYTGKVLVQCLYEPDPATGQMVRVRDSYVAIAKVCFGPKLGARAVSIAQLIELLMTCILYVVVC 248
            ||||..::..|.   :..||.:     :|..|.:..|| |.|...:.:....||...|:.::::.
plant   190 CCYTATLMKDCF---ENKTGII-----TYPDIGEAAFG-KYGRILICMLLYTELYSYCVEFIILE 245

  Fly   249 GDLLAGTYPQGSFDSRSWML--------FVGIFLLPMGFLKSLKMVSTLSFWCTMSH--IVINAV 303
            ||.|.|.:|..|.|...:.|        ...:.:||..:||.|:::|.||....::.  |.::..
plant   246 GDNLTGLFPGTSLDLLGFRLDSKHLFGILTALIVLPTVWLKDLRIISYLSAGGVIATALIAVSVF 310

  Fly   304 ILGYCLLQIGDWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHI 368
            .||    ..|..|:.....::.....|.::|:..|.|:.....|.:..:|.|::|||..:....|
plant   311 FLG----TTGGIGFHHTGQAVKWNGIPFAIGIYGFCYSGHSVFPNIYQSMADKTKFNKAVITCFI 371

  Fly   369 AAAVFKAGFGYICFLTFQNDTQQVITNNL-HSQGFKGMVNFFLVIKALLSYPLPYYAACELLERN 432
            ...:...|...:.:|.|...|...||.|: ..|.|..:..:..|:.....|.|    ....|.|:
plant   372 ICVLLYGGVAIMGYLMFGEATLSQITLNMPQDQFFSKVAQWTTVVSPFTKYAL----LMNPLARS 432

  Fly   433 FFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWP 497
            .....|:.....||..        |..|..::.|::..|..||.|.::|..|||....:::.|.|
plant   433 IEELLPERMSENIWCF--------LLLRTALVASSVCSAFLIPFFGLMMALIGSLLSILVAIIMP 489

  Fly   498 CYFHIKIKGHLLDQKEIAKDYLIIGLGVLFGVIGIYDSGNALINAFE 544
            ....|||.|:...:.::....:|:.:||:.|.:|.|.|...:|..::
plant   490 ALCFIKIMGNKATRTQMILSSIIVAIGVVSGTLGTYSSVAKIIRNYQ 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 98/399 (25%)
AT2G41190NP_030664.1 SLC5-6-like_sbd 148..525 CDD:382020 98/403 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 129 1.000 Domainoid score I1712
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H56451
Inparanoid 1 1.050 137 1.000 Inparanoid score I1814
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D570025at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2748
orthoMCL 1 0.900 - - OOG6_100570
Panther 1 1.100 - - O PTHR48017
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.830

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