DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and AUX1

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_565882.1 Gene:AUX1 / 818390 AraportID:AT2G38120 Length:485 Species:Arabidopsis thaliana


Alignment Length:538 Identity:101/538 - (18%)
Similarity:158/538 - (29%) Gaps:233/538 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KDYEQPPGSTAQQ------HHHS-----------QQAQ------HKAMEAGMDGGDTTEMSSNPF 75
            ||.|:..|||...      |..|           |.||      :...:.||..|...::.   :
plant    25 KDNEEHDGSTGSNLSNFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGIVLQIF---Y 86

  Fly    76 RNAGSWTNDGEGGGDGDGEYRNEYQ-STSFNEYDGRYQQTDGFRQGSIASEGSSFVCEGEGGGGC 139
            ...||||               .|. |..:.||..|.::           ||.||          
plant    87 GLLGSWT---------------AYLISVLYVEYRARKEK-----------EGKSF---------- 115

  Fly   140 KIDEFQAAWNVTNAIQGMFIVSLPFAVLH---GGYWAIVAMVGIAHICCYTGKVLVQCLYEPDPA 201
                      ..:.||.       |.||.   |.||   ..:|:|..|.:               
plant   116 ----------KNHVIQW-------FEVLDGLLGSYW---KALGLAFNCTF--------------- 145

  Fly   202 TGQMVRVRDSYVAIAKVCFGPKLGARAVSIAQLIELLMTCILYVVVCGDLLAGTYPQGSFDSRSW 266
                            :.||        |:.|||    .|...:....|.|         |.|:|
plant   146 ----------------LLFG--------SVIQLI----ACASNIYYINDHL---------DKRTW 173

  Fly   267 MLFVGIFLLPMGFLKSLKM----------VSTLSFWCTMSHIVINAVILGYCLLQIGDWGWSKVR 321
            ....|.......|:.|...          ::|.:.|    ::.|.::|.|..         ..|:
plant   174 TYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAW----YLAIASIIHGQA---------EGVK 225

  Fly   322 FSIDMENFPISLGVIVFSYTSQIFLPTLEGNMI-----------DRSKFNWMLDWSHI------- 368
            .|     .|..| |:.|:..:.| |.|..|:.:           .:.|:.:::...::       
plant   226 HS-----GPTKL-VLYFTGATNI-LYTFGGHAVTVEIMHAMWKPQKFKYIYLMATLYVFTLTIPS 283

  Fly   369 AAAVFKAGFGYICFLTFQNDTQQVITNNLHSQGF----KGMVNFFLVIKALLSYPLPYYAACELL 429
            ||||:.| ||            ..:.:  ||..|    |.......||..|:...:.:..||..|
plant   284 AAAVYWA-FG------------DALLD--HSNAFSLMPKNAWRDAAVILMLIHQFITFGFACTPL 333

  Fly   430 ERNFFRGPPKTKFPTIWNLDGELKVWGLG----------FRVGVIVSTILMAIFIPHFSILMGFI 484
               :|          :|.     ||.|:.          .|:.|::....:||..|.|..:...:
plant   334 ---YF----------VWE-----KVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAV 380

  Fly   485 GSFTGTMLSFIWPCYFHI 502
            |:...:...:|.|...|:
plant   381 GALLVSFTVYIIPSLAHM 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 74/404 (18%)
AUX1NP_565882.1 PLN03074 2..469 CDD:215559 101/538 (19%)

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