DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and SLC38A1

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001265319.1 Gene:SLC38A1 / 81539 HGNCID:13447 Length:503 Species:Homo sapiens


Alignment Length:464 Identity:108/464 - (23%)
Similarity:185/464 - (39%) Gaps:91/464 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 EYQSTSFNEYDGRYQQTDGFRQGSIASEGSSFVCEGEGGGGC--------KIDEF--------QA 146
            |.|:.:..|.|.....::.|.:.......|.|:.:.|.....        |.||:        .:
Human    12 ELQNMTVPEDDNISNDSNDFTEVENGQINSKFISDRESRRSLTNSHLEKKKCDEYIPGTTSLGMS 76

  Fly   147 AWNVTNAIQGMFIVSLPFAVLHGGYWA-IVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVRD 210
            .:|::|||.|..|:.|.||:.:.|... :|.:..:..:..|:..:|:.|..|    ||.||    
Human    77 VFNLSNAIMGSGILGLAFALANTGILLFLVLLTSVTLLSIYSINLLLICSKE----TGCMV---- 133

  Fly   211 SYVAIAKVCFGPKLGARAVSIAQLIELLMTCILYV-VVCGDL------LAG---TYPQGSFDSRS 265
             |..:.:..|| ..|...:..|..::.....:.|: :|..:|      |.|   |:.....|.|.
Human   134 -YEKLGEQVFG-TTGKFVIFGATSLQNTGAMLSYLFIVKNELPSAIKFLMGKEETFSAWYVDGRV 196

  Fly   266 WMLFV--GIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGYCLLQI---------------- 312
            .::.|  || :||:..||:|..:...|.: ::|.:|...:::.|...||                
Human   197 LVVIVTFGI-ILPLCLLKNLGYLGYTSGF-SLSCMVFFLIVVIYKKFQIPCIVPELNSTISANST 259

  Fly   313 -GDWGWSK-VRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRS--KFNWMLDWSHIAAAV- 372
             .|....| |.|:   .....:|..|.|::.....:..:...:.|||  |...:.:.|..|..| 
Human   260 NADTCTPKYVTFN---SKTVYALPTIAFAFVCHPSVLPIYSELKDRSQKKMQMVSNISFFAMFVM 321

  Fly   373 --FKAGFGYICFLTFQNDTQQVITNNLHSQGFKG-----MVNFFLVIKALLSYPLPYYAACELLE 430
              ..|.|||   |||.::.|   ::.||....|.     .|...:::..:|:.|:.::.    :.
Human   322 YFLTAIFGY---LTFYDNVQ---SDLLHKYQSKDDILILTVRLAVIVAVILTVPVLFFT----VR 376

  Fly   431 RNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFI 495
            .:.|....||||    ||.....|..:     ::|...|:.||||....:.|.:|..:..||.||
Human   377 SSLFELAKKTKF----NLCRHTVVTCI-----LLVVINLLVIFIPSMKDIFGVVGVTSANMLIFI 432

  Fly   496 WPCYFHIKI 504
            .|...::||
Human   433 LPSSLYLKI 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 97/410 (24%)
SLC38A1NP_001265319.1 SLC5-6-like_sbd 69..480 CDD:382020 97/407 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165158538
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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