DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and slc38a8b

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:XP_021327596.1 Gene:slc38a8b / 795255 ZFINID:ZDB-GENE-121005-6 Length:444 Species:Danio rerio


Alignment Length:467 Identity:94/467 - (20%)
Similarity:168/467 - (35%) Gaps:128/467 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 KIDEFQAAWNVTNAIQGMFIVSLPFAV-LHGGYWAIVAMVGIAHICCYTGKVLVQCLYEPDPATG 203
            ::..|.|.:.:..:..|..:::.|:|. ..||....:::..::.:...:|.|::        ...
Zfish    26 RLGSFGAIFIMLKSALGAGLLNFPWAFEKAGGVNTAISVEMVSLVFLISGLVIL--------GYA 82

  Fly   204 QMVRVRDSYVAIAKVCFGPKLGARA----------VSIAQLI----ELLMTCI-LYVVVCGDLLA 253
            ..:..:::|..:.:...|.::|...          :|:|.|:    :|...|: ||..|.|:..|
Zfish    83 SSISRQNTYHDVVRNVCGRRIGHLCEICFVFNLFMISVAFLVVVQDQLEKLCLSLYETVTGNTEA 147

  Fly   254 GTYPQGSFDSRSWMLFVG-IFLLPMGFLKSLKMVSTLSFWCTMSHIVIN-AVILGYCLLQ----- 311
            ........|.|..:.|:. |.:||:...|.:.:....|...|::...:: |||..|.|..     
Zfish   148 EMPHHWYTDYRFALSFMCLIIILPLSIPKEIGIQKYTSVMGTLAATYLSVAVIAKYYLKDTHTAD 212

  Fly   312 --------IGDW------------GWSKVRFSI----DMENFPISLGVIVFSYTSQIF---LPTL 349
                    :|.|            |:.....||    .|||..|:..|.: |.||.||   :.||
Zfish   213 LTPEHSQGLGSWASMFSVVPTICFGFQCHEASIAIYSSMENKKITHWVFI-SVTSMIFCLLIYTL 276

  Fly   350 EGNMIDRSKFNWMLDWSHIAAAVFKAGFGYICFLTFQNDTQQVITNNLHSQGFKGMVNFFLVI-- 412
            .|      .|.::.....:|:.:..:..|        ||...:|...|.......:....|::  
Zfish   277 TG------VFGFLTFGRKVASDILMSYPG--------NDVVMIIARLLFGISIVTIYPIILLLGR 327

  Fly   413 KALLSYPLPYYAACELLERN-----FFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAI 472
            ..:|:..|.::      ||.     .|.|..:.....:|                 |..|:|:||
Zfish   328 SVILTQILRFW------ERRTIMTPVFEGRCRLILTILW-----------------ITVTLLIAI 369

  Fly   473 FIPHFSILMGFIGS--------FTGTMLSFIW---PCYFHIKIKGHLLDQKEIAKDYLIIGLGVL 526
            |:|..|.::..||.        |.|..|.|:.   |....|:|              |:.|.||:
Zfish   370 FVPDMSEVISVIGGISAFFIFIFPGLCLIFVMQTEPINHRIRI--------------LLTGWGVV 420

  Fly   527 FGVIGIYDSGNA 538
            ..|||.:..|.:
Zfish   421 TIVIGAFIFGQS 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 93/456 (20%)
slc38a8bXP_021327596.1 SLC5-6-like_sbd 32..438 CDD:320982 93/461 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594484
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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