DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and Slc38a3

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001186146.1 Gene:Slc38a3 / 76257 MGIID:1923507 Length:505 Species:Mus musculus


Alignment Length:499 Identity:96/499 - (19%)
Similarity:193/499 - (38%) Gaps:119/499 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 QSTSFNEYDGRYQQTDGFRQGSIASEGSSFVCEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPF 164
            |.|...::.|   :..||.|.|.:.|......||:...|..:      :|::|||.|..|:.|.:
Mouse    33 QRTEDTQHCG---EGKGFLQKSPSKEPHFTDFEGKTSFGMSV------FNLSNAIMGSGILGLAY 88

  Fly   165 AVLHGG-YWAIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVRDSYVAIAKVCFGPKLGARA 228
            |:.:.| ...:..:..:|.:..|:..:|::        :..:|.:| :|..:....||.. |..|
Mouse    89 AMANTGIILFLFLLTAVALLSSYSIHLLLK--------SSGIVGIR-AYEQLGYRAFGTP-GKLA 143

  Fly   229 VSIAQLIELL--MTCILYVV------VCGDLLAGTYPQGSF--DSRSWMLFVGI-FLLPMGFLKS 282
            .::|..::.:  |:..||::      |....|....|...:  |....::.|.: .:||:..::.
Mouse   144 AALAITLQNIGAMSSYLYIIKSELPLVIQTFLNLEKPASVWYMDGNYLVILVSVTIILPLALMRQ 208

  Fly   283 LK--------MVSTLSFW------------CTMSHIVINAVILGYCLLQIGDWGWSKVR------ 321
            |.        .:|.:.|:            |.::|.:.||.         |::....|.      
Mouse   209 LGYLGYSSGFSLSCMVFFLIAVIYKKFQVPCPLAHNLANAT---------GNFSHMVVAEEKAQL 264

  Fly   322 ----------------FSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAA 370
                            |:::.:. ..::.::.|::.....:..:...:.|.|| ..|...|:::.
Mouse   265 QGEPDTAAEAFCTPSYFTLNSQT-AYTIPIMAFAFVCHPEVLPIYTELKDPSK-RKMQHISNLSI 327

  Fly   371 AV------FKAGFGYICFLTFQNDTQQVITNNLHSQG----FKGM---VNFFLVIKALLSYPLPY 422
            ||      ..|.|||   |||.:..:..:   ||:..    |..:   |...::|...|:.|:..
Mouse   328 AVMYVMYFLAALFGY---LTFYDGVESEL---LHTYSKVDPFDVLILCVRVAVLIAVTLTVPIVL 386

  Fly   423 YAACELLERNFFRGPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSF 487
            :.....:::..|:....:     |       :..:....|::....|:.||.|:...:.|.||:.
Mouse   387 FPVRRAIQQMLFQNQEFS-----W-------LRHVLIATGLLTCINLLVIFAPNILGIFGIIGAT 439

  Fly   488 TGTMLSFIWPCYFHIKIKGHLLDQKEIAKDYLIIGLGVLFGVIG 531
            :...|.||:|..|:.:|   :...||.|:....| |.:.|..:|
Mouse   440 SAPCLIFIFPAIFYFRI---MPTDKEPARSTPKI-LALCFAAVG 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 85/455 (19%)
Slc38a3NP_001186146.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..48 4/17 (24%)
Aa_trans 63..492 CDD:279788 87/466 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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