DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and slc38a2

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001038569.1 Gene:slc38a2 / 566537 ZFINID:ZDB-GENE-030131-9659 Length:504 Species:Danio rerio


Alignment Length:513 Identity:117/513 - (22%)
Similarity:193/513 - (37%) Gaps:129/513 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 STSFNEYDGRYQQ------TDGFRQGSIASEGSSFVCE--------------GEGGGGCKIDEFQ 145
            ||:.|||. .||.      .:|.:...:.:|..:|:.:              |....|..:    
Zfish    21 STNSNEYT-NYQDHASKVPLNGIQYSDVEAESQNFLSDHHLGKKKYEAEYSPGSASFGMSV---- 80

  Fly   146 AAWNVTNAIQGMFIVSLPFAVLHGGY-WAIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRVR 209
              :|:.|||.|..|:.|.:|:.:.|. ..::.:|.:|....|:..:|::...|    .|.:|   
Zfish    81 --FNLGNAIMGSGILGLSYAMANTGIAMFVILLVAVAIFSLYSVHLLLKTANE----GGSLV--- 136

  Fly   210 DSYVAIAKVCFG-PKLGARAVSIAQLIELLMTCILYVV------VCGDLLAGT----YPQGSFDS 263
              |..:....|| |...|.:.||.......|...||:|      |....|...    |..|.:  
Zfish   137 --YEQLGYKAFGIPGKLAASCSITMQNFGAMASYLYIVKYELPIVIRAFLDSNDNAWYTNGDY-- 197

  Fly   264 RSWMLFVGI-FLLPMGFLKSLKMV---STLSFWCTMSHIVINAVILGYCLLQI------------ 312
              .:|.|.: .:||:..||:|..:   |..|..|    :|...:::.|...||            
Zfish   198 --LVLIVTMSIILPLSLLKNLGYLGYTSGFSLLC----MVFFLIVVIYKKFQIPCPLPENFINIT 256

  Fly   313 ------------GDWGWSKVRFSIDMENFPISLGVIVFSYTSQ-IFLPTLEGNMIDRS--KFNWM 362
                        .|....|.::.|.......::.::.|::... ..||..| .:.|||  |...:
Zfish   257 VNVSQPPQTNNSTDEECCKPKYFIFNSQTVYAVPILTFAFVCHPAILPMYE-ELKDRSRRKMQNV 320

  Fly   363 LDWSHIAAAV---FKAGFGYICFLTFQNDTQQVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYA 424
            .:.|.:...:   ..|.|||:.|      .:.|....||:  :..:.||.:|   ||...|....
Zfish   321 ANVSFLGMFIMYLLAALFGYLTF------NEAVEPELLHT--YSKVYNFDVV---LLIVRLAVLT 374

  Fly   425 ACELLERNFFRGPPKTKFP---TIWNLDGELKVWG----LGFRVGVIVSTILMAIFIPHFSILMG 482
            |..|.       .|...||   ::.:|.|..|.:.    :...|.::|...::.||:|....:.|
Zfish   375 AVTLT-------VPVVLFPIRTSVNHLLGASKEFSWPRHICITVALLVCVNILVIFVPTIRDIFG 432

  Fly   483 FIGSFTGTMLSFIWPCYFHIKIKGHLLDQKEIAKD--------YLIIGLGVLFGVIGI 532
            |||:....||.||.|..|:||     |.:||..|.        :||:|..|:.|.:.:
Zfish   433 FIGASAAAMLIFILPSAFYIK-----LVKKESMKSVQKIGATLFLIMGFLVMTGSMAL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 105/450 (23%)
slc38a2NP_001038569.1 Regulates protein turnover upon amino acid deprivation. /evidence=ECO:0000250 1..99 19/84 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 4/6 (67%)
SLC5-6-like_sbd 72..488 CDD:444915 107/461 (23%)

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