DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and SLC38A4

DIOPT Version :9

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001137296.1 Gene:SLC38A4 / 55089 HGNCID:14679 Length:547 Species:Homo sapiens


Alignment Length:601 Identity:117/601 - (19%)
Similarity:212/601 - (35%) Gaps:217/601 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 TNDGEGGGD---GDGEYRNEYQSTSFNEYDGRYQQ--TDGFRQGSIASEGSSFVCEGEGGGGCKI 141
            ::.||...|   |.|.......|:.|...|...|:  |:||.                  |..|:
Human    17 SSSGESAPDSYIGIGNSEKAAMSSQFANEDTESQKFLTNGFL------------------GKKKL 63

  Fly   142 DEF------------QAAWNVTNAIQGMFIVSLPFAVLHGG-YWAIVAMVGIAHICCYTGKVLVQ 193
            .::            .:::|::|||.|..|:.|.:|:.:.| ...|:.::.:|.:..|:..:|::
Human    64 ADYADEHHPGTTSFGMSSFNLSNAIMGSGILGLSYAMANTGIILFIIMLLAVAILSLYSVHLLLK 128

  Fly   194 CLYEPDPATGQMVRVRDSYVAIAKVCFG--PKLGARAVSIAQLIELLMTCILYVVV--------- 247
            ...|    .|.::     |..:.:..||  .|:|| .|||.......|:..|:::.         
Human   129 TAKE----GGSLI-----YEKLGEKAFGWPGKIGA-FVSITMQNIGAMSSYLFIIKYELPEVIRA 183

  Fly   248 -------CGD-LLAGTYPQGSFDSRSWMLFVGI-FLLPMGFLKSLKMVS-TLSFWCTMSHIVINA 302
                   .|: .|.|.|         .::||.: .:||:..||:|..:. |..|..|.....::.
Human   184 FMGLEENTGEWYLNGNY---------LIIFVSVGIILPLSLLKNLGYLGYTSGFSLTCMVFFVSV 239

  Fly   303 VILGYCLLQIGDWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSH 367
            ||            :.|.:....:.....|:|.:.|:.|..:.:..|..|. :.|..|:|:|::|
Human   240 VI------------YKKFQIPCPLPVLDHSVGNLSFNNTLPMHVVMLPNNS-ESSDVNFMMDYTH 291

  Fly   368 ----------IAAAVFKAGFGYIC---------FLTFQNDTQQVITNNLHSQGFKGMVNFFLVIK 413
                      ...::..:|..|..         :..|.:.|...|.               :::.
Human   292 RNPAGLDENQAKGSLHDSGVEYEAHSDDKCEPKYFVFNSRTAYAIP---------------ILVF 341

  Fly   414 ALLSYP--LPYYAACELLERNFFRGPPKTKFPTIWNLD--------------------GEL---- 452
            |.:.:|  ||.|:  ||.:|:      :.|..|:.|:.                    ||:    
Human   342 AFVCHPEVLPIYS--ELKDRS------RRKMQTVSNISITGMLVMYLLAALFGYLTFYGEVEDEL 398

  Fly   453 -----KVWGLGF-----RVGVIVSTIL-------------------------------------- 469
                 ||:.|..     |:.|:|:..|                                      
Human   399 LHAYSKVYTLDIPLLMVRLAVLVAVTLTVPIVLFPIRTSVITLLFPKRPFSWIRHFLIAAVLIAL 463

  Fly   470 ---MAIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIKI---KGHLLDQKEIAKDYLIIGLGVLFG 528
               :.|.:|....:.||||:.:.|||.||.|..|::|:   :.....||..|..:|::|:..:.|
Human   464 NNVLVILVPTIKYIFGFIGASSATMLIFILPAVFYLKLVKKETFRSPQKVGALIFLVVGIFFMIG 528

  Fly   529 VIG------IYDSGNA 538
            .:.      |||..|:
Human   529 SMALIIIDWIYDPPNS 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:382020 99/527 (19%)
SLC38A4NP_001137296.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30 3/12 (25%)
SdaC 71..534 CDD:223884 99/517 (19%)
SLC5-6-like_sbd 73..535 CDD:294310 99/516 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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