DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and slc38a2

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001011056.1 Gene:slc38a2 / 496466 XenbaseID:XB-GENE-6258676 Length:493 Species:Xenopus tropicalis


Alignment Length:517 Identity:108/517 - (20%)
Similarity:196/517 - (37%) Gaps:126/517 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 DGEGGGDGDGEYRNEYQSTSF---NEYDGRYQQTDGFRQGSIASEGSSFVCEGEGGGGCKIDEF- 144
            |.:.....|....:|||..:.   :.||...:......:.:::.:    .||.|...|  ...| 
 Frog    12 DEDSSNSNDDLNYSEYQPKNHPIKSHYDMDIENVHFLLEPTMSKK----KCETEYLPG--TTSFG 70

  Fly   145 QAAWNVTNAIQGMFIVSLPFAVLHGGY-WAIVAMVGIAHICCYTGKVLVQCLYEPDPATGQMVRV 208
            .:.:|::|||.|..|:.|.:|:.:.|. ..::.:|.:.....|:..:|::...|    .|.::  
 Frog    71 MSVFNLSNAIVGSGILGLSYAMANTGIALFMILLVFVTVFSLYSIHLLLKTANE----GGSLL-- 129

  Fly   209 RDSYVAIAKVCFG--PKLGARAVSIAQLIELLMTCILYVV----------------------VCG 249
               |..:....||  .||.|......|.|. .|:..||:|                      :.|
 Frog   130 ---YEQLGLKAFGIPGKLAASGSVTLQNIG-AMSSYLYIVKYELPLVIKALMDIKESNGEWYLNG 190

  Fly   250 DLLAGTYPQGSFDSRSWMLFVGI-FLLPMGFLKSLKMVSTLSFWCTMSHIVINAVILGY------ 307
            |.|              ::.|.: .:||:..|::|..:...|.:..:..:....|:: |      
 Frog   191 DYL--------------VIMVSLAIILPLSLLRNLGYLGYTSGFSPLCMVFFLIVVI-YKKFEIP 240

  Fly   308 CLLQI-----------------GDWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMID 355
            |.|:.                 .|....|.::.:.......::.::.||:.....:..:...:..
 Frog   241 CPLEAMNMTSNSSSHDHMAHNETDDEMCKPKYFVFNSQTVYAVPILTFSFVCHPAVLPIYQELKG 305

  Fly   356 RSKFNWMLDWSHIA-AAVF-----KAGFGYICFLTFQNDTQQVITNNLHSQGFKGMVNFFLV-IK 413
            ||: ..|::.|::: .|:|     .|.|||   |||.:..:..:.:. :|:.|...|.|.:| :.
 Frog   306 RSR-RRMMNVSNVSFFAMFIMYLLAALFGY---LTFYSKVEPELLHT-YSKVFGAGVIFVVVRLA 365

  Fly   414 ALLSYPLPYYAACELLERNFFRGPPKTKFPTIWNLDGELKVWGLGF--------RVGVIVSTILM 470
            .|::..|..               |...||...:|: ||...|..|        ...::..|.::
 Frog   366 VLMAVTLTV---------------PIVIFPIRSSLN-ELFCSGKDFAWIRHILITFLILAFTNVL 414

  Fly   471 AIFIPHFSILMGFIGSFTGTMLSFIWPCYFHIKIKGHLLDQKEIAKDYLIIGLGVLFGVIGI 532
            .||:|....:.||||:....||.||.|..|:|:     |.:||..|....|| .:||.:.||
 Frog   415 VIFVPTIRDIFGFIGASAAAMLVFILPSAFYIR-----LVKKESMKSVQKIG-ALLFLIGGI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 97/454 (21%)
slc38a2NP_001011056.1 Regulates protein turnover upon amino acid deprivation. /evidence=ECO:0000250 1..92 19/85 (22%)
SLC5-6-like_sbd 65..482 CDD:444915 98/460 (21%)

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