DRSC/TRiP Functional Genomics Resources

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Protein Alignment VGAT and slc32a1

DIOPT Version :10

Sequence 1:NP_610938.1 Gene:VGAT / 36574 FlyBaseID:FBgn0033911 Length:549 Species:Drosophila melanogaster
Sequence 2:NP_001004943.1 Gene:slc32a1 / 448348 XenbaseID:XB-GENE-489830 Length:518 Species:Xenopus tropicalis


Alignment Length:502 Identity:219/502 - (43%)
Similarity:300/502 - (59%) Gaps:42/502 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 HSQQAQHKAMEAGMDGGDTTEMSSNPFRNAGSWTNDGEGGGDGDGEYRNEYQSTSFNEYDGRYQQ 113
            |.|..|...::..:..||.|                    .:||..|                 |
 Frog    54 HRQGLQMDILKTEVPSGDPT--------------------AEGDSHY-----------------Q 81

  Fly   114 TDGFRQGSIASEGSSFVCEGEGGGGCKIDEFQAAWNVTNAIQGMFIVSLPFAVLHGGYWAIVAMV 178
            .||....|.||:......|....|..||..::|.|||||||||||::.||:|:|||||..:..::
 Frog    82 RDGTGPPSSASKDEGLCSELSSYGKPKITAWEAGWNVTNAIQGMFVLGLPYAILHGGYLGLFLII 146

  Fly   179 GIAHICCYTGKVLVQCLYEPDPATGQMVRVRDSYVAIAKVCFG---PKLGARAVSIAQLIELLMT 240
            ..|.:||||||:|:.|||| :...|:.||||||||.||..|..   ||||.|.|::||:|||:||
 Frog   147 FAAVVCCYTGKILIACLYE-ENEDGETVRVRDSYVDIANACCAPRFPKLGGRVVNVAQIIELVMT 210

  Fly   241 CILYVVVCGDLLAGTYPQGSFDSRSWMLFVGIFLLPMGFLKSLKMVSTLSFWCTMSHIVINAVIL 305
            |||||||.|:|:..::|......:||.:.....|||..|||:||.||..|..||::|.|||.:::
 Frog   211 CILYVVVSGNLMYNSFPSLPISQKSWSIIATAMLLPCAFLKNLKAVSKFSLLCTLAHFVINVLVI 275

  Fly   306 GYCLLQIGDWGWSKVRFSIDMENFPISLGVIVFSYTSQIFLPTLEGNMIDRSKFNWMLDWSHIAA 370
            .|||.:..||.|.||:|.||::.||||:|:||||||||||||:|||||....:|:.|::|:||||
 Frog   276 AYCLSRARDWAWDKVKFYIDVKKFPISIGIIVFSYTSQIFLPSLEGNMQSPKEFHCMMNWTHIAA 340

  Fly   371 AVFKAGFGYICFLTFQNDTQQVITNNLHSQGFKGMVNFFLVIKALLSYPLPYYAACELLERNFFR 435
            .:.|..|..:.:||:.::|::|||:||.|. .:.:||.|||.|||||||||::||.|:||::.|:
 Frog   341 CILKGLFALVAYLTWADETKEVITDNLPST-IRAVVNLFLVAKALLSYPLPFFAAVEVLEKSLFQ 404

  Fly   436 GPPKTKFPTIWNLDGELKVWGLGFRVGVIVSTILMAIFIPHFSILMGFIGSFTGTMLSFIWPCYF 500
            ...:..||..:..||.||.|||..|..::|.|:||||::|||::|||..||.||..|.|:.|..|
 Frog   405 EGARAFFPNCYGGDGRLKSWGLTLRCALVVFTLLMAIYVPHFALLMGLTGSLTGAGLCFLLPSLF 469

  Fly   501 HIKIKGHLLDQKEIAKDYLIIGLGVLFGVIGIYDSGNALINAFEIGL 547
            |:|:....|...::..|..|..:|.:..|.|...|...||.||...:
 Frog   470 HLKLLWRKLQWHQVFFDVSIFVIGSICSVSGFVHSLEGLIEAFRFNI 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VGATNP_610938.1 SLC5-6-like_sbd 144..533 CDD:444915 195/391 (50%)
slc32a1NP_001004943.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 66..98 12/68 (18%)
Aa_trans 108..505 CDD:279788 197/398 (49%)

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